Isolation and Characterization of Dibenzofuran-degrading Actinomycetes : Analysis of Multiple Extradiol Dioxygenase Genes in Dibenzofuran-degrading Rhodococcus Species(Biochemistry & Molecular Biology)

スポンサーリンク

概要

• 論文の詳細を見る

• Sixteen actinomycetes capable of utilizing dibenzofuran as a sole source of carbon and energy were isolated, including Rhodococcus, Microbacterium, and Terrabacter genera. Heretofore, no dibenzofuran-utilizing strain belonging to the genus Microbacterium has been reported. Five extradiol dioxygenase genes (dfdB, and edi1 to 4) of the strain Rhodococcus sp. YK2 were cloned and analyzed. The nucleotide sequence of dfdB gene was almost identical to the bphC1 gene of Terrabacter sp. DPO360, which was involved in dibenzofuran metabolism in this strain. Southern and Northern hybridization analyses using these extradiol dioxygenase genes as probes suggest that the dfdB gene in YK2 was conserved in diverse dibenzofuran-utilizing actinomycetes ; also, the dfdB gene was the only expressed gene among five extradiol dioxygenase genes in the medium containing DF as a sole carbon source. These results suggest that the dfdB gene is important for dibenzofuran metabolism not only in the strain YK2, but also in diverse dibenzofuran-degrading actinomycetes.

• 社団法人日本農芸化学会の論文
• 2002-07-23

著者

• Kudo Toshiaki

  Environmental Molecular Biology Lab. :graduate School Of Integrated Science Yokohama City University

• Kudo Toshiaki

  Laboratory Of Microbiology The Institute Of Physical And Chemical Research(riken)

• KUDO Toshiaki

  Microbiology Laboratory, RIKEN

• Takio Koji

  Riken

• Takio Koji

  Biomolecular Characterization Division Riken

• Takio K

  Enviromental Molecular Biology Lab. Riken

• Kudo T

  Inst. Physical And Chemical Res.(riken) Saitama Jpn

• Kudo T

  Riken (inst. Physical And Chemical Res.) Wako Jpn

• Kudo T

  Bio-recycle Project Japan Science And Technology Agency:environmental Molecular Biology Laboratory R

• Kudo T

  Environmental Molecular Biology Laboratory Riken

• Kudo T

  Riken Saitama Jpn

• Kudo Toshiaki

  International Graduate School Of Arts And Sci. Yokohama City Univ.

• Kudo Toshiaki

  Yokohama City Univ. Kanagawa Jpn

• Iida Toshiya

  Ecomolecular Biorecycling Science Research Team, RIKEN Advanced Science Institute

• Nakamura Kaoru

  Ecomolecular Biorecycling Science Research Team, RIKEN Advanced Science Institute

• IIDA Toshiya

  Microbiolgoy Laboratory, RIKEN (The Institute of Physical and Chemical Research)

• MUKOUZAKA Yuki

  Microbiolgoy Laboratory, RIKEN (The Institute of Physical and Chemical Research)

• NAKAMURA Kaoru

  Microbiolgoy Laboratory, RIKEN (The Institute of Physical and Chemical Research)

• YAMAGUCHI Isamu

  Environmental Plant Research Group, RIKEN (The Institute of Physical and Chemical Research)

• Kudo Toshiaki

  Microbial Toxicology Laboratory The Institute Of Physical And Chemical Research

• Takio K

  Biomolecular Characterization Division Riken

• Iida Toshiya

  Biotechnology Laboratory Department Of Applied Chemistry Faculty Of Engineering Okayama University O

• Mukouzaka Yuki

  Microbiolgoy Laboratory Riken (the Institute Of Physical And Chemical Research):graduate School Of S

• Nakamura K

  Ecomolecular Biorecycling Science Research Team Riken Advanced Science Institute

• Iida Toshiya

  Environmental Molecular Biology Laboratory Riken Institute

• Yamaguchi Isamu

  Environmental Plant Research Group Riken (the Institute Of Physical And Chemical Research)

関連論文

• Functional Expression of Three Rieske Non-Heme Iron Oxygenases Derived from Actinomycetes in Rhodococcus Species for Investigation of Their Degradation Capabilities of Dibenzofuran and Chlorinated Dioxins
• Expression of a Novel 90-kDa Protein, Lsd90, Involved in the Metabolism of Very Long-chain Fatty Acid-containing Phospholipids in a Mitosis-defective Fission Yeast Mutant
• PA-42 An alternative pathway of primary metabolism of termite gut protists inferred from meta-EST analysis(Symbiosis/Cell to cell interaction,Poster presentation A)
• Effect of Temporal Sample Preservation on the Molecular Study of a Complex Microbial Community in the Gut of the Termite Microcerotermes sp
• Identification and in situ Detection of Two Lineages of Bacteroidales Ectosymbionts Associated with a Termite Gut Protist, Oxymonas sp.
• Fungal Community Analysis of Fungus Gardens in Termite Nests
• Isolation and Detection of Methanogens from the Gut of Higher Termites
• Gut of Higher Termites as a Niche for Alkaliphiles as Shown by Culture-Based and Culture-Independent Studies
• Nitrogen Fixation Genes Expressed in the Symbiotic Microbial Community in the Gut of the Termite Coptotermes formosanus
• Molecular Phylogeny of Symbiotic Basidiomycetes of Fungus-growing Termites in Thailand and Their Relationship with the Host(Microbiology & Fermentation Technology)
• Diverse Bacteria Related to the Bacteroides Subgroup of the CFB Phylum within the Gut Symbiotic Communities of Various Termites(Microbiology & Fermentation Technology)
• Purification and Characterization of L-2,3-Butanediol Dehydrogenase of Brevibacterium saccharolyticum C-1012 Expressed in Escherichia coli(Microbiology & Fermentation Technology)
• Characterization of the NADH-Linked Acetylacetoin Reductase/2, 3-Butanediol Dehydrogenase Gene from Bacillus cereus YUF-4
• Cloning, Expression and Nucleotide Sequence of the L-2, 3-Butanediol Dehydrogenase Gene from Brevibacterium saccharolyticum C-1012
• Molecular Generation of an Escheichia coli Srain Pproducing Only the meso-Isomer of 2,3-Butanediol
• Sequence Analysis of the Gene for and Characterization of D-Acetoin Forming meso-2,3-Butanediol Dehydrogenase of Klebsiella pneumoniae Expressed in Escherichia coli
• Cloning, Nucleotide Sequence, and Hyperexpression of α-Amylase Gene from an Archaeon, Thermococcus profundus
• Preparation of a Chiral Acetoinic Compound Using Transgenic Escherichia coli Expressing the 2,3-Butanediol Dehydrogenase Gene
• An Alkaliphilic and Xylanolytic Paenibacillus Species Isolated from the Gut of a Soil-Feeding Termite
• A shaE Deletion Mutant Showed Lower Na^+ Sensitivity Compared to Other Deletion Mutants in the Bacillus subtilis Sodium/Hydrogen Antiporter (Sha) System
• Molecular ecology of termite-microorganisms symbiotic systems(Symposium on Various Interactions between Animal and Microorganism)
• TONSOKU is Expressed in S Phase of the Cell Cycle and its Defect Delays Cell Cycle Progression in Arabidopsis
• 3PA012 X-ray crystal structure analysis of hyperthermostable glutamate dehydrogenase from Thermococcus profundus
• PCNB 分解菌 Pseudomonas aeruginosa I-41 株の分離および特性
• Production, and Biological Characterization, of Dideoxygriseorhodin C by a Streptomyces sp. and Its Taxonomy
• Nucleotide Sequence of the Xylanase A Gene of Alkalophilic Bacillus sp. Strain C-125(Microbiology & Fermentation Industry)
• Extracellular Production of Alkaline Xylanase of Alkalophilic Bacillus sp. by Escherichia coli Carrying pCX311
• Extracellular Production of Xylanase L in Escherichia coli using Excretion Vector pEAP2
• Purification and Partial Characterization of Alkaline Xylanase from Escherichia coli Carrying pCX311
• Molecular Cloning and Expression of β-Isopropylmalate Dehydrogenase Gene from Alkalophilic Bacillus in Escherichia coli
• Isolation of the Fragments from Alkalophilic Bacillus sp. DNA Which are Controlled by Temperature, pH or NaCl Concentration in pGR71 CAT Expression System
• Gene Expression and Production of Bacillus No. 170 Penicillinase in Escherichia coli and Bacillus subtilis
• Molecular Cloning of β-isopropylmalate dehydrogenase Gene from Clostridium butyricum M588
• The Effect of pH on Heat-resistance of Spores of Alkalophilic Bacillus No. 2b-2
• Effect of pH and Sodium Ion on Germination of Alkalophilic Bacillus Species
• Plasmids in Alkalophilic Bacillus sp.
• Molecular Cloning, Nucleotide Sequence and Expression in Escherichia coli of Hyperthermophilic Glutamate Dehydrogenase Gene from Thermococcus profundus
• Properties of Glutamate Dehydrogenase and Its Involvement in Alanine Production in a Hyperthermophilic Archaeon, Thermococcus Profundus^1
• Location of F_1 ATPase-like Genes on the Physical Map of the Bacillus subtilis 168 Chromosome
• Crystal Structure of meso-2,3-Butanediol Dehydrogenase in a Complex with NAD^+ and Inhibitor Mercaptoethanol at 1.7 A Resolution for Understanding of Chiral Substrate Recognition Mechanisms
• Isolation and Identification of Novel ADP-Ribosylated Proteins from Streptomyces coelicolor A3 (2)(Biochemistry & Molecular Biology)
• Carbon mineralization by termites in tropical forests, with emphasis on fungus combs
• Nucleotide Sequences and Characterization of Genes Encoding Naphthalene Upper Pathway of Pseudomonas aeruginosa PaK1 and Pseudomonas putida OUS82
• 2P143 First crystal structure of the 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase(33. Redox enzyme,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)
• Isolation and Characterization of Dibenzofuran-degrading Actinomycetes : Analysis of Multiple Extradiol Dioxygenase Genes in Dibenzofuran-degrading Rhodococcus Species(Biochemistry & Molecular Biology)
• Production of Homo-and Hetero-Dimeric Isozymes from Two Aldehyde Oxidase Gense of Arabidopsis thaliana
• TWO ALDEHYDE OXIDASE GENES OF ARABIDOPSIS THALIANA ENCODE PEPTIDES FOR THREE DIMERIC ISOZYMES
• Molecular Cloning of a Novel Sex Pheromone Responsible for the Release of a Different Sex Pheromone in Closterium peracerosum-strigosum-littorale Complex
• MOLECULAR ANALYSIS OF ALDEHYDE OXIDASE GENE FROM MAIZE COLEOPTILES
• A Monoclonal Antibody, 3A10, Recognizes a Specific Amino Acid Sequence Present on a Series of Developmentally Expressed Brain Proteins
• Localization of the Phosphatidylserine-Binding Site of Glyceraldehyde-3-Phosphate Dehydrogenase Responsible for Membrane Fusion
• Large-Scale Identification of Elicitor-Responsive Genes in Suspension-Cultured Rice Cells by DNA Microarray
• P19 タイの農耕地におけるシロアリキノコ(Termitomyces spp.)の発生に関与する生態的要因
• Bacillus属の芳香族化合物分解遺伝子群の解析 : 微生物
• α-amylase遺伝子からみた Streptococcus bovisと Streptococcus equinusの類縁関係 : 微生物
• プラスチックを食う微生物 (特集 微生物は建築をほろぼす?) -- (建築のほろび方--そしてその救い方)
• P-405 SITE-SPECIFIC FUNCTIONALIZATION OF PROTEINS BY ORGANOPALLADIUM REACTIONS
• Detection of Molecular Ions of Non-Covalent Complexes of Ras・GDP and Ras・GppNp by MALDI-TOFMS
• Cloning of the pathogenicity-related gene FPD1 in Fusarium oxysporum f. sp. lycopersici
• Physiological Properties of a Neutralo-sensitive Mutant Derived from Facultative Alkaliphilic Bacillus sp. C-125
• Characterization of a Mutation Responsible for an Alkali-sensitive Mutant, 18224, of Alkaliphilic Bacillus sp. strain C-125
• Characteristics of Alkali-sensitive Mutants of Alkaliphilic Bacillus sp. Strain C-125 That Show Cellular Morphological Abnormalities
• ヒト血漿超低密度リポ蛋白の酸化とNε-ヘキサノイールリジンの生成
• Phylogenetic and Morphological Diversity of Bacteroidales Members Associated with the Gut Wall of Termites
• Characterization of a Thermostable Lysine-Specific Metalloendopeptidase from the Fruiting Bodies of a Basidiomycete, Grifola frondosa
• Effect of Ascorbate on Acrolein Modification of Very Low Density Lipoprotein and Uptake of Oxidized Apolipoprotein E by Hepatocytes
• Effect of α-Tocopherol on the Oxidative Modification of Apolipoprotein E in Human Very-low-density Lipoprotein(Food & Nutrition Science)
• Role of Conserved Residues of the WRKY Domain in the DNA-binding of Tobacco WRKY Family Proteins(Biochemistry & Molecular Biology)
• Expression Patterns of Two Genes for the Delta-Subunit of Mitochondrial F_1-ATP Synthase from Sweet Potato in Transgenic Tobacco Plants and Cells
• A Major Jasmonate-Inducible Protein of Sweet Potato, Ipomoelin, is an ABA-Independent Wound-Inducible Protein
• Insecticidal Activity and Processing in Larval Gut Juices of Genetically Engineered 130-kDa Proteins of Bacillus thuringiensis subsp. aizawai
• Construction of Chimeric Insecticidal Proteins between the 130-kDa and 135-kDa Proteins of Bacillus thuringiensis subsp. aizawai for Analysis of Structure-Function Relationship(Biological Chemistry)
• Cloning and Expression in Escherichia coli of the 135-kDa Insecticidal Protein Gene from Bacillus thuringiensis subsp. aizawai IPL7(Biological Chemistry)
• Kinetic Characterization of Lysine-Specific Metalloendopeptidases from Grifola frondosa and Pleurotus ostreatus Fruiting Bodies
• Two Sets of Biphenyl and PCB Degradation Genes on a Linear Plasmid in Rhodococcus erythropolis TA421
• A Gram-positive Polychlorinated Biphenyl-degrading Bacterium, Rhodococcus eryth-ropolis Strain TA421, Isolated from a Termite Ecosystem
• Purification and Characterization of α-Amylase from Hyperthermophilic Archaeon Thermococcus profundus, Which Hydrolyzes Both α-1, 4 and α-1, 6 Glucosidic Linkages
• Multiplicity of 2, 3-Dihydroxybiphenyl Dioxygenase Genes in the Gram-positive Polychlorinated Biphenyl Degrading Bacterium Rhodococcus rhodochrous K37
• Extracellular Production of Human Immunoglobulin ε-Chain/γ1-Chain Chimeric Fc Polypeptide by Escherichia coli
• Extracellular Production of Human Tumor Necrosis Factor-α by Escherichia coli Using a Chemically-synthesized Gene(Biological Chemistry)
• Cloning and Characterization of the Azurin iso-1 Gene, Concerned with the Electron Transport Chain Involved in Methylamine/Methanol Oxidation in the Obligate Methylotroph Methylomonas sp. Strain J
• Genetic Organization and Characterization of the mau Gene Cluster, Which Concerned the Initial Step of Electron Transport Chains Involved in Methylamine Oxidation of the Obligate Methylotroph Methylomonas sp. Strain J
• Physiological Properties of Two Pseudomonas mendocina Strains Which Assimilate Styrene in a Two-Phase (Solvent-Aqueous) System under Static Culture Conditions
• Production of 3-Vinylcatechol and Physiological Properties of Pseudomonas LF-3, Which Can Assimilate Styrene in a Two-phase (Solvent-Aqueous) System
• Functional Expression of Three Rieske Non-Heme Iron Oxygenases Derived from Actinomycetes in Rhodococcus Species for Investigation of Their Degradation Capabilities of Dibenzofuran and Chlorinated Dioxins
• Site-specific incorporation of 4-lodo-L-phenylalanine through opal suppression
• Polychlorinated Biphenyl/Biphenyl Degrading Gene Clusters in Rhodococcus sp. K37, HA99, and TA431 Are Different from Well-Known bph Gene Clusters of Rhodococci

もっと見る 閉じる

スポンサーリンク