Deletion and Insertion of a 192-Residue Peptide in the Active-Site Domain of Glycosyl Hydrolase Family-2 β-Galactosidases
スポンサーリンク
概要
- 論文の詳細を見る
The monomeric multimetal-binding β-galactosidase of Saccharopolyspora rectivirgula (srbg), a glycosyl hydrolase family-2 enzyme, has a unique sequence consisting of 192 amino acid residues with no similarity to known proteins. This 192-residue sequence (termed the "ι[iota] sequence") appears to be inserted into a sequence homologous to the active-site domain of the Escherichia coli lacZ enzyme (lacZbg). To assess the effects of the ι sequence at specific sites of β-galactosidase on the catalytic functioning and molecular properties of β-galactosidase, deletion or insertion mutants of β-galactosidases were constructed, expressed in LacZ- E. coli strains, and characterized: srbgΔ in which the ι sequence was deleted from srbg, and lacZbgI, in which the 192-residue ι sequence was inserted into the corresponding position (between Asp^<591> and Phe^<592>) in the active-site domain of lacZbg. srbgΔ was a catalytically inactive, dimeric protein which retained multimetalbinding characteristics, suggesting that the ι sequence is very important for maintaining the structure necessary for the catalytic functioning and the monomeric structure of srbg but is not responsible for the unique metal ion requirements of srbg. On the other hand, lacZbgl existed as a mixture of a monomer, a tetramer, and higher multimers. The monomeric species was inactive, whereas the tetramer and other multimers were catalytically active ( V_<max>/K_m value, 25% of that of lacZbg) and highly specific for β-D-galactoside. The tetrameric lacZbgl was activated by Mg^<2+> and Mn^<2+> with lowered metal affinities, and the stoichiometry of metal binding was unchanged from that of lacZbg. These results, along with the published stereo structure of lacZbg, suggest that, in lacZbgl, the inserted 192-residue ι peptide could fold independently of the lacZbg domains into a "sub-domain," lying distant from the active site and subunit interfaces.
- 社団法人日本生物工学会の論文
- 2002-06-20
著者
-
Nishino Tokuzo
Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University
-
Nakayama Toru
Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University
-
石井 正浩
University Of Tokyo
-
Nishino T
Department Of Biomolecular Engineering Graduate School Of Engineering Tohoku University
-
石井 正治
東京大学大学院農学生命科学研究科応用工学専攻
-
Nishino Tokuzo
Dep. Of Biochemistry And Engineering Graduate School Of Engineering Tohoku Univ. Aoba-yama Sendai Mi
-
Ishii M
Department Of Biotechnology Graduate School Of Agricultural And Life Sciences University Of Tokyo
-
Ishii Masaharu
Dep. Of Biotechnology Graduate School Of Agricultural And Life Sciences Univ. Of Tokyo
-
Hemmi H
Tohoku Univ. Miyagi Jpn
-
Hemmi Hisashi
Department Of Biomolecular Engineering Graduate School Of Engineering Tohoku University
-
Hemmi Hisashi
Department Of Biochemistry And Engineering Tohoku University
-
Hemmi Hisashi
Dep. Of Biochemistry And Engineering Graduate School Of Engineering Tohoku Univ. Aoba-yama Sendai Mi
-
INOHARA-OCHIAI MISA
Suntory Research Center
-
HASEGAWA SATOSHI
Department of Biomolecular Engineering, Graduate School of Engineering, Thhoku University
-
IGUCHI SOTA
Department of Biomolecular Engineering, Graduate School of Engineering, Thhoku University
-
ASHIKARI TOSHIHIKO
Suntory Research Center
-
SHIBANO YUJI
Suntory Research Center
-
Nakayama Toru
Department Of Biomolecular Engineering Graduate School Of Engineering Tohoku University
-
Iguchi Sota
Department Of Biomolecular Engineering Graduate School Of Engineering Thhoku University
-
Shibano Yuji
Suntory Research Center:(present Address)suntory Ltd.
-
Shibano Yuji
Department Of Molecular Biology Biomolecular Engineering Research Institute
-
Shibano Yuji
Department Of Moleular Biology Biomolecular Engineering Research Insitute
-
Amachi T
Kyoto Univ. Kyoto Jpn
-
Hamada Hiroaki
Department Of Life Science Faculty Of Science Okayama University Of Science
-
Nishino Tokuzo
Department Of Biochemistry And Engineering Faculty Of Engineering Tohoku University
-
Ishii Masaharu
Graduate School Of Agricultural And Life Sciences The University Of Tokyo
-
Haruta Shin
Department Of Biotechnology Graduate School Of Agricultural And Life Sciences The University Of Toky
-
Shibano Yuji
Suntory Limited
-
Hemmi Hisashi
Department Of Applied Molecular Biosciences Graduate School Of Bioagricultural Sciences Nagoya Unive
-
Yamashita Satoshi
Department Of Biochemistry And Engineering Graduate School Of Engineering Tohoku University
-
Hasegawa S
Department Of Biomolecular Engineering Graduate School Of Engineering Thhoku University
-
NAKAYAMA Toru
Department of Applied Microbial Technology, The Kumamoto Institute of Technology:(Present office)Institute for Fundamental Research, Suntory Ltd.
関連論文
- E-バイオの幕開け(随縁随意)
- Gene Structure and Expression Profile of Cytochrome bc Nitric Oxide Reductase from Hydrogenobacter thermophilus TK-6
- Purification, Characterization, and Gene Cloning of Thermophilic Cytochrome cd_1 Nitrite Reductase from Hydrogenobacter thermophilus TK-6(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- 黒酢と生物代謝の狭間で考えたこと
- Production of tetraketide lactones by mutated Antirrhinum majus chalcone synthases (AmCHS1)(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- BR-P7 Succinate production from glycerol with acetate as an electron sink(Section IV Biorefinery)
- Sequencing and Reverse Transcription-Polymerase Chain Reaction (RT-PCR) Analysis of Four Hydrogenase Gene Clusters from an Obligately Autotrophic Hydrogen-Oxidizing Bacterium, Hydrogenobacter thermophilus TK-6(GENETICS, MOLECULAR BIOLOGY, AND GENE ENGINEE
- Purification and Properties of Glutamine Synthetase from Hydrogenobacter thermophilus TK-6(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Two Tandemly Arranged Ferredoxin Genes in the Hydrogenobacter thermophilus Genome : Comparative Characterization of the Recombinant [4Fe-4S] Ferredoxins
- 3-ヒドロキシプロピオン酸サイクルで機能する炭酸固定反応
- Analyses of Microbial Community within a Composter Operated Using Household Garbage with Special Reference to the Addition of Soybean Oil
- Purification and Characterization of Membrane-bound Hydrogenase from Hydrogenobacter thermophilus Strain TK-6,an Obligately Autotrophic, Thermophilic, Hydrogen-oxidizing Bacterium
- 還元的TCAサイクル-好熱好気性・絶対独立栄養性水素細菌Hgdrogenobacter thermophilus TK-6株のCO_2・エネルギー代謝を中心として-
- Growth Characteristics and Dense Culture of a Thermophilic Cyanobacterium, Chroococcidiopsis sp. Strain TS-821
- Carboxylation Reactions of Pyruvate:Ferredoxin Oxidoreductase and 2-Oxoglutarate:Ferredoxin Oxidoreductase from Hydrogenobacter thermophilus TK-6
- Purification and Characterization of Ferredoxin from Hydrogenobacter thermophilus Strain TK-6
- Purification and Some Properties of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase from a Thermophilic Hydrogen-Oxidizing Bacterium, Pseudomonas hydrogeneothermophila Strain TH-1
- Methionaquinone is a Direct Natural Electron Acceptor for the Membrane-bound Hydrogenase in Hydrogenobacter thermophilus Strain TK-6(Biological Chemistry)
- Colony Formation of Hydrogenobacter thermophilus on a Plate Solidified with GELRITE(Microbiology & Fermentation Industry)
- Purification and Some Properties of Cytochrome c552 from Hydrogenobacter thermophilus
- The Membrane-bound Hydrogenase Reduces Cytochrome c552 in Hydrogenobacter thermophilus strain TK-6
- 物質生産ツールとしての微細藻 : 電子指向型バイオテクノロジー(e-バイオ)を起点とする藻類工学の夜明け(第62回大会シンポジウム報告)
- Overexpression of an Archaeal Geranylgeranyl Diphosphate Synthase in Escherichia coli Cells
- Identification of Genes Affecting Lycopene Formation in Escherichia coli Transformed with Carotenoid Biosynthetic Genes: Candidates for Early Genes in Isoprenoid Biosynthesis
- Recognition of Allylic Substrates in Sulfolobus acidocaldarius Geranylgeranyl Diphosphate Synthase: Analysis Using Mutated Enzymes and Artificial Allylic Substrates^1
- Effects of Random Mutagenesis in a Putative Substrate-Binding Domain of Geranylgeranyl Diphosphate Synthase upon Intermediate Formation adn Substrate Specificity^1
- Introduction of the Archaebacterial Geranylgeranyl Pyrophosphate Synthase Gene into Chlamydomonas reinhardtii Chloroplast
- Identification of an inducible glucosyltransferase from Phytolacca americana L. cells that are capable of glucosylating capsaicin
- Effect of mutagenesis at the region upstream from the G(Q/E) motif of three types of geranylgeranyl diphosphate synthase on product chain-length(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Microbial Diversity in Biodegradation and Reutilization Processes of Garbage
- Molecular Cloning and Characterization of a Thermostable Carboxylesterase from an Archaeon, Sulfolobus shibatae DSM5389 : Non-Linear Kinetic Behavior of a Hormone-Sensitive Lipase Family Enzyme(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Molecular Biological Analysis of Microflora in a Garbage Treatment Process under Thermoacidophilic Conditions(ENVIRONMENTAL BIOTECHNOLOGY)
- Deciphering the Molecular Basis of the Broad Substrate Specificity of α-Glucosidase from Bacillus sp. SAM1606
- Discovery of Acidulocomposting; An Accelerated Composting Process of Garbage That is Autonomously Sustained under the Thermoacidophilic Conditions for Prolonged Periods of Time
- Deletion and Insertion of a 192-Residue Peptide in the Active-Site Domain of Glycosyl Hydrolase Family-2 β-Galactosidases
- Novel Sugar Phosphotransferase System Applicable to the Efficient Labeling of the Compounds Synthesized via the Non-Mevalonate Pathway in Escherichia coli
- An Active-Site Mutation Causes Enhanced Reactivity and Altered Regiospecificity of Transglucosylation Catalyzed by the Bacillus sp.SAM1606 α-Glucosidase
- Zinc-Finger Genes That Specifically Express in Pistil Secretory Tissues of Petunia
- 3P-1127 グリセロールからのコハク酸生産時に働く炭酸固定経路の解明と生産能の向上(3b代謝工学,一般講演,代謝生理学・発酵生産,伝統の技と先端科学技術の融合)
- Effect of Adding Cellulolytic Bacterium on Stable Cellulose-Degrading Microbial Community(ENVIRONMENTAL BIOTECHNOLOGY)
- PA-36 The Thermodynamic of Interspecies Electron Transfer(Symbiosis/Cell to cell interaction,Poster presentation A)
- 2G14-3 Comparisons of Sensory Quality, Nutrition Value and Microbial Composition among Home-made and Commercial Soypaste in China
- Archaeal Population on Supporting Material in Methanogenic Packed-Bed Reactor(ENVIRONMENTAL BIOTECHNOLOGY)
- 3I09-3 Development of a microbial community being effective for ensiling rice straw at low temperature
- Microbial Community in Methanogenic Packed-Bed Reactor Successfully Operating at Short Hydraulic Retention Time(ENVIRONMENTAL BIOTECHNOLOGY)
- Effects of Water-Soluble Carbohydrate Content on Silage Fermentation of Wheat Straw(ENVIRONMENTAL BIOTECHNOLOGY)
- Succession of a Microbial Community during Stable Operation of a Semi-continuous Garbage-Decomposing System(ENVIRONMENTAL BIOTECHNOLOGY)
- Isolation and Characterization of Predominant Microorganisms during Decomposition of Waste Materials in a Field-Scale Composter
- Characterization of a Microorganism Isolated from the Effluent of Hydrogen Fermentation by Microflora
- 119 Selective and sensitive detection of Escherichia coil in cornposting process by PCR amplification of the 16S rRNA genes
- Primary Structure and Catalytic Properties of a Cold-active Esterase from a Psychrotroph, Acinetobacter sp. Strain No.6. Isolated from Siberian Soil(Biochemistry & Molecular Biology)
- Cold-Active Lipolytic Activity of Psychrotrophic Acinetobacter sp. Strain No.6
- Gene Cloning and Overexpression of a Geranylgeranyl Diphosphate Synthase of an Extremely Thermophilic Bacterium, Thermus thermophilus
- Denaturing Gradient Gel Electrophoresis Analyses of Microbial Community from Field-Scale Composter
- Physiological and Chemotaxonomical Studies on Microflora within a Composter Operated at High Temperature
- Anthocyanin acyltransferase engineered for the synthesis of a novel polyacylated anthocyanin
- Identification of a cDNA Encoding Malonyl-Coenzyme A: Anthocyanidin 3-O-Glucoside 6"-O- Malonyltransferase from Cineraria (Senecio cruentus) Flowers
- 2P-2060 共培養により誘導されるリグニン分解菌ラッカーゼの精製と特性評価および誘導物質の解析(5c バイオマス,資源,エネルギー工学,一般演題,環境バイオテクノロジー,伝統の技と先端科学技術の融合)
- PD28 FORMATION OF 12-HYDROXYSQUALENE CATALYZED BY SQUALENE SYNTHETASE
- 生ごみの処理・再資源化技術
- Purification and Characterization of Membrane-bound Hydrogenase from a Thermophilic Hydrogen-Oxidizing Bacterium, Pseudomonas hydrogenothermophila Strain TH-1
- Isolation and Cultivation of Thermophilic Cyanobacteria from Hot Springs of Northern Thailand
- Electron Transport System in Pseudomonas hydrogenothermophila Strain TH-1, a Thermophilic Hydrogen-oxidizing Bacterium
- Substrate Specificities of Several Prenyl Chain Elongating Enzymes with Respect to 4-Methyl-4-pentenyl Diphosphate
- An Artificial Substrate for the Thermostable Farnesyl Diphosphate Synthase from Bacillus stearothermophilus
- Mutational Analysis of the Role of His452 of Saccharopolyspora rectivirgula β-Galactosidase
- HPLC Analysis and Optimization of Enzymatic Synthesis of 4'-O-(β-_D-Glucopyranosyl)-_D-Pantothenic Acid
- Cloning, Sequencing, and Heterologous Expression of a Gene Coding for Arthromyces ramosus Peroxidase
- 特集によせて(生物工学と「食」の接点)
- まえがき
- 伝統的発酵食品研究の旨み(バイオミディア)
- 「本気」の引き出し方
- 古細菌の生物学
- S45 化学エネルギーによる生物的炭酸ガス有機資源化
- Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste(ENVIRONMENTAL BIOTECHNOLOGY)
- Enzymology of Aurone Biosynthesis(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Hopanoid Biosynthesis of Zymomonas mobilis(Microbiology & Fermentation Industry)
- Biochemical characterization and mutational studies of a chalcone synthase from yellow snapdragon (Antirrhinum majus) flowers
- 微生物における独立栄養的炭酸固定経路の多様性(微生物炭酸固定 : その特徴と利用)
- Determinative Factors of Competitive Advantage between Aerobic Bacteria for Niches at the Air-Liquid Interface
- Thermostable Collagenolytic Activity of a Novel Thermophilic Isolate, Bacillus sp.Strain NTAP-1
- Substrate Specificities of Wild and Mutated Farnesyl Diphosphate Synthases from Bacillus Stearothermophilus with Artificial Substrates
- Significance of Asn-77 and Trp-78 in the Catalytic Function of Undecaprenyl Diphosphate Synthase of Micrococcus luteus B-P 26^1
- Thiosulfate Oxidation by a Thermo-Neutrophilic Hydrogen-Oxidizing Bacterium, Hydrogenobacter thermophilus
- Gene cloning and biochemical characterization of a catalase from Gluconobacter oxydans(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste
- Detecting weak protein-protein interactions by modified far-western blotting(METHODS)
- 1Cp19 RNA-SIP法によるメタン発酵槽内の還元的酢酸生成菌の多様性解析(環境工学・廃水処理技術,一般講演)
- Changes in the gene expression profile of Acetobacter aceti during growth on ethanol(MICROBIAL PHYSIOLOGY AND BIOTECHNOLOGY)
- Quantitative analyses of the behavior of exogenously added bacteria during an acidulocomposting process(ENVIRONMENTAL BIOTECHNOLOGY)
- 生物炭酸固定と生物工学(「環境」と生物工学,バイオ技術10年の軌跡,創立90周年記念特別企画)
- 特集によせて(「環境」と生物工学,バイオ技術10年の軌跡,創立90周年記念特別企画)
- 生物炭酸固定と生物工学
- 特集によせて
- Involvement of Flagella-Driven Motility and Pili in Pseudomonas aeruginosa Colonization at the Air-Liquid Interface
- Catalytic removal of acetaldehyde in saliva by a Gluconobacter strain(MICROBIAL PHYSIOLOGY AND BIOTECHNOLOGY)
- Involvement of Flagella-Driven Motility and Pili in Pseudomonas aeruginosa Colonization at the Air-Liquid Interface
- 伝統的発酵食品研究の旨み
- Purification, characterization, and primary structure of a novel N-acyl-D-amino acid amidohydrolase from Microbacterium natoriense TNJL143-2(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Purification, characterization, and primary structure of a novel N-acyl-D-amino acid amidohydrolase from Microbacterium natoriense TNJL143-2