Effect of mutagenesis at the region upstream from the G(Q/E) motif of three types of geranylgeranyl diphosphate synthase on product chain-length(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
スポンサーリンク
概要
- 論文の詳細を見る
(All-E) geranylgeranyl diphosphate synthases have been classified into three types based on the characteristic sequences around the first aspartate rich motif, which is highly conserved among the enzymes. In type I geranylgeranyl diphosphate synthases, which consist of archaeal enzymes, a bulky amino acid residue at the 5th position upstream from the motif plays a main role in the product determination, by blocking further elongation of prenyl chain as the bottom of the reaction cavity. On the other hand, type III geranylgeranyl diphosphate synthases, which consist of the enzymes from eukaryotes except for plants, use a bulky amino acid residue at the 2nd position upstream from the conserved G(Q/E) motif for product chain-length determination. Thus we introduced mutations into the region upstream from the G(Q/E) motif of geranylgeranyl diphosphate synthases of the three different types to confirm the importance of the region for the product chain-length determination. The results of the mutational analyses indicated that not only the 2nd but also the 3rd position upstream from the G(Q/E) motif is involved in the product chain-length determination mechanism in types I and III geranylgeranyl diphosphate synthases, while the amino acid substitution in this region did not affect the chain-length of the products of type II geranylgeranyl diphosphate synthase, which consist of the enzymes from bacteria and plants. The region upstream from the G(Q/E) motif possibly contributes to the product determination in the wide range of geranylgeranyl diphosphate synthases, as well as that around the first aspartate rich motif.
- 社団法人日本生物工学会の論文
著者
-
西野 友年
神戸大理
-
Nishino Tokuzo
Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University
-
Nakayama Toru
Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University
-
Nishino T
Department Of Biomolecular Engineering Graduate School Of Engineering Tohoku University
-
KATAGIRI Takashi
Department of Medicine, Division of Cardiology, Shown University School of Medicine
-
Nishino Tokuzo
Dep. Of Biochemistry And Engineering Graduate School Of Engineering Tohoku Univ. Aoba-yama Sendai Mi
-
Hemmi H
Tohoku Univ. Miyagi Jpn
-
Hemmi Hisashi
Department Of Biomolecular Engineering Graduate School Of Engineering Tohoku University
-
Hemmi Hisashi
Department Of Biochemistry And Engineering Tohoku University
-
Hemmi Hisashi
Dep. Of Biochemistry And Engineering Graduate School Of Engineering Tohoku Univ. Aoba-yama Sendai Mi
-
Noike Motoyoshi
Department of Biochemistry and Engineering, Graduate School of Engineering, Tohoku University
-
Nakayama Toru
Department Of Biomolecular Engineering Graduate School Of Engineering Tohoku University
-
Katagiri Takashi
Department Of Applied Chemistry Faculty Of Engineering Osaka University
-
Hamada Hiroaki
Department Of Life Science Faculty Of Science Okayama University Of Science
-
Nishino Tokuzo
Department Of Biochemistry And Engineering Faculty Of Engineering Tohoku University
-
Katagiri Takashi
Department Of Biochemistry And Engineering Graduate School Of Engineering Tohoku University
-
Hemmi Hisashi
Department Of Applied Molecular Biosciences Graduate School Of Bioagricultural Sciences Nagoya Unive
-
Noike Motoyoshi
Inst. Of Multidisciplinary Res. For Advanced Materials Tohoku Univ. Sendai 980-8577 Jpn
-
NAKAYAMA Toru
Department of Applied Microbial Technology, The Kumamoto Institute of Technology:(Present office)Institute for Fundamental Research, Suntory Ltd.
関連論文
- 21pEA-5 Wilson数値くりこみ群のスケールフリー性(21pEA 電子系・量子スピン系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- 25pQD-8 DMRGから派生したテンソルネットワーク形式(密度行列繰り込み群(DMRG)の新展開,領域11,領域3,領域5,領域8合同シンポジウム,領域5,光物性)
- 双曲平面上の古典格子模型と1次元量子系と1粒子量子力学 (量子科学における双対性とスケール)
- 25pQD-8 DMRGから派生したテンソルネットワーク形式(領域11,領域3,領域5,領域8合同シンポジウム:密度行列繰り込み群(DMRG)の新展開,領域3,磁性,磁気共鳴)
- 25pQD-8 DMRGから派生したテンソルネットワーク形式(領域11,領域3,領域5,領域8合同シンポジウム:密度行列繰り込み群(DMRG)の新展開,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- ガラス板の隙間に生じる干渉縞(談話室)
- Production of tetraketide lactones by mutated Antirrhinum majus chalcone synthases (AmCHS1)(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Inhibitory Effect of Valsartan Against Progression of Left Ventricular Dysfunction After Myocardial Infarction : T-VENTURE Study
- OE-410 Long-term Effects of Dietary-lifestyle Modification at 6 months after Hospital Discharge in Patients with Acute Myocardial Infarction(OE69,ACS/AMI (Clinical/Treatment) 2 (IHD),Oral Presentation (English),The 73rd Annual Scientific Meeting of The Ja
- OE-260 Impact of Cardiac Rehabilitation on 10-year Mortality in Patients with Acute Myocardial Infarction(OE44,Exercise Test/Cardiac Rehabilitation (H),Oral Presentation (English),The 73rd Annual Scientific Meeting of The Japanese Circulation Society)
- OE-256 Effects of Cardiac Rehabilitation are Pronounced in Elderly Patients with Acute Myocardial Infarction(OE44,Exercise Test/Cardiac Rehabilitation (H),Oral Presentation (English),The 73rd Annual Scientific Meeting of The Japanese Circulation Society)
- FRS-020 Adiponectin Transgenic Mice can Strongly Suppress Neointimal Hyperplasia after Vascular Injury without Enhanced Expression of It's Receptor in Vessels(FRS4,Topics in Peripheral Arterial Disease (H),Featured Research Session (English),The 73rd Annu
- Small LDL-Cholesterol is Superior to LDL-Cholesterol for Determining Severe Coronary Atherosclerosis
- OE-410 Long-term Effects of Dietary-lifestyle Modification at 6 months after Hospital Discharge in Patients with Acute Myocardial Infarction(OE69,ACS/AMI (Clinical/Treatment) 2 (IHD),Oral Presentation (English),The 73rd Annual Scientific Meeting of The Ja
- FRS-020 Adiponectin Transgenic Mice can Strongly Suppress Neointimal Hyperplasia after Vascular Injury without Enhanced Expression of It's Receptor in Vessels(FRS4,Topics in Peripheral Arterial Disease (H),Featured Research Session (English),The 73rd Annu
- 26pQK-10 双曲変形による一次元量子スピン鎖の励起ギヤップ評価(量子スピン系,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- 22pEH-15 一次元量子スピン鎖の励起ギャップ評価 : 双曲変形を用いたスケーリング解析(22pEH 量子スピン系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- Overexpression of an Archaeal Geranylgeranyl Diphosphate Synthase in Escherichia coli Cells
- Identification of Genes Affecting Lycopene Formation in Escherichia coli Transformed with Carotenoid Biosynthetic Genes: Candidates for Early Genes in Isoprenoid Biosynthesis
- Recognition of Allylic Substrates in Sulfolobus acidocaldarius Geranylgeranyl Diphosphate Synthase: Analysis Using Mutated Enzymes and Artificial Allylic Substrates^1
- Effects of Random Mutagenesis in a Putative Substrate-Binding Domain of Geranylgeranyl Diphosphate Synthase upon Intermediate Formation adn Substrate Specificity^1
- Introduction of the Archaebacterial Geranylgeranyl Pyrophosphate Synthase Gene into Chlamydomonas reinhardtii Chloroplast
- Identification of an inducible glucosyltransferase from Phytolacca americana L. cells that are capable of glucosylating capsaicin
- Effect of mutagenesis at the region upstream from the G(Q/E) motif of three types of geranylgeranyl diphosphate synthase on product chain-length(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Microbial Diversity in Biodegradation and Reutilization Processes of Garbage
- Molecular Cloning and Characterization of a Thermostable Carboxylesterase from an Archaeon, Sulfolobus shibatae DSM5389 : Non-Linear Kinetic Behavior of a Hormone-Sensitive Lipase Family Enzyme(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Molecular Biological Analysis of Microflora in a Garbage Treatment Process under Thermoacidophilic Conditions(ENVIRONMENTAL BIOTECHNOLOGY)
- Deciphering the Molecular Basis of the Broad Substrate Specificity of α-Glucosidase from Bacillus sp. SAM1606
- Discovery of Acidulocomposting; An Accelerated Composting Process of Garbage That is Autonomously Sustained under the Thermoacidophilic Conditions for Prolonged Periods of Time
- Deletion and Insertion of a 192-Residue Peptide in the Active-Site Domain of Glycosyl Hydrolase Family-2 β-Galactosidases
- Novel Sugar Phosphotransferase System Applicable to the Efficient Labeling of the Compounds Synthesized via the Non-Mevalonate Pathway in Escherichia coli
- An Active-Site Mutation Causes Enhanced Reactivity and Altered Regiospecificity of Transglucosylation Catalyzed by the Bacillus sp.SAM1606 α-Glucosidase
- Zinc-Finger Genes That Specifically Express in Pistil Secretory Tissues of Petunia
- Primary Structure and Catalytic Properties of a Cold-active Esterase from a Psychrotroph, Acinetobacter sp. Strain No.6. Isolated from Siberian Soil(Biochemistry & Molecular Biology)
- Cold-Active Lipolytic Activity of Psychrotrophic Acinetobacter sp. Strain No.6
- Gene Cloning and Overexpression of a Geranylgeranyl Diphosphate Synthase of an Extremely Thermophilic Bacterium, Thermus thermophilus
- 23pTE-5 Wilson数値くりこみ群のスケールフリー性II(23pTE 電子系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- Anthocyanin acyltransferase engineered for the synthesis of a novel polyacylated anthocyanin
- Identification of a cDNA Encoding Malonyl-Coenzyme A: Anthocyanidin 3-O-Glucoside 6"-O- Malonyltransferase from Cineraria (Senecio cruentus) Flowers
- PD28 FORMATION OF 12-HYDROXYSQUALENE CATALYZED BY SQUALENE SYNTHETASE
- 8a-PS-91 2個のS=1/2スピンと2個のS=1スピンが交互に並んでいる量子スピン鎖の基底状態II
- 26pQK-9 OpenではないOpen Boundary Conditionとは何やねん?(量子スピン系,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- 繰り込みか?それとも変分か? : 双曲変形という考え方(京都大学基礎物理学研究所研究会 密度行列繰り込み群法を用いた物性研究の新展開,研究会報告)
- 双曲平面上のイジング模型が示す臨界現象 (繰りこみ群の数理科学での応用)
- 23aWD-2 双曲平面上で角転送行列繰込みやってみよか(古典・量子スピン系,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- 23aWD-3 双曲平面における統計模型の臨界現象(古典・量子スピン系,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- 22pTS-1 最適な有限領域の数値繰込み群(古典スピン系,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- 19pWA-13 有限サイズクラスターに適用する「DMRGモドキ」なアルゴリズム(フラストレート系,古典スピン系,領域11,統計力学,物性基礎論,応用数学,力学,流体物理)
- 18aWA-9 最小作用の原理からみる実時間DMRG(量子スピン系,領域11,原子・分子,量子エレクトロニクス,放射線物理)
- Snapshot Observation for 2D Classical Lattice Models by Corner Transfer Matrix RG(Applications of Renormalization Group Methods in Mathematical Sciences)
- Product Wave Function Renormalization Group : Construction from the Matrix Product Point of View(General)
- 二次元量子スピン系のテンソル積変分法による解析(2004年度後期基礎物理学研究所研究会「モンテカルロ法の新展開3」,研究会報告)
- Substrate Specificities of Several Prenyl Chain Elongating Enzymes with Respect to 4-Methyl-4-pentenyl Diphosphate
- An Artificial Substrate for the Thermostable Farnesyl Diphosphate Synthase from Bacillus stearothermophilus
- Mutational Analysis of the Role of His452 of Saccharopolyspora rectivirgula β-Galactosidase
- HPLC Analysis and Optimization of Enzymatic Synthesis of 4'-O-(β-_D-Glucopyranosyl)-_D-Pantothenic Acid
- Cloning, Sequencing, and Heterologous Expression of a Gene Coding for Arthromyces ramosus Peroxidase
- 21pXE-2 スルッとKAKUDAI(有効エリア拡大法in古典系DMRG)(古典スピン系一般・古典フラストレート系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- 18aRC-5 量子転送行列の最大固有値状態に対する行列積状態近似
- Ground-State Phase Diagram of the Spin-1/2-1/2-1-1 Chain : Condensed Matter: Electronic Properties, etc.
- Enzymology of Aurone Biosynthesis(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Hopanoid Biosynthesis of Zymomonas mobilis(Microbiology & Fermentation Industry)
- Corner Transfer Matrix Renormalization Group Method Applied to the Ising Model on the Hyperbolic Plane(General)
- Biochemical characterization and mutational studies of a chalcone synthase from yellow snapdragon (Antirrhinum majus) flowers
- 角転送行列繰り込み群による古典スピン系のスナップショット生成(2004年度後期基礎物理学研究所研究会「モンテカルロ法の新展開3」,研究会報告)
- 21pXE-1 有限領域の山積み拡大を用いた数値繰り込み群(古典スピン系一般・古典フラストレート系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- 27aYC-4 自由空間における一粒子DMRG(量子力学・量子カオス,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- 26pYC-3 行列積状態を用いた有限な系のスケーリング解析(古典スピン系・古典フラストレート系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- 14pTB-12 CTMRG による古典スピン系のスナップショット生成(古典スピン系・古典フラストレート系, 領域 11)
- 14aTB-3 波動関数のテンソル積分解による量子スピン系基底状態の研究(量子スピン系, 領域 11)
- Stable Optimization of a Tensor Product Variational State(Condensed Matter and Statistical Physics)
- Stable Optimization of a Tensor Product Variational State
- Matrix Product State Approximation for the Maximum-Eigenvalue Eigenstate of the Quantum Transfer Matrix
- Two-Dimensional Tensor Product Variational Formulation
- Thermostable Collagenolytic Activity of a Novel Thermophilic Isolate, Bacillus sp.Strain NTAP-1
- Substrate Specificities of Wild and Mutated Farnesyl Diphosphate Synthases from Bacillus Stearothermophilus with Artificial Substrates
- Significance of Asn-77 and Trp-78 in the Catalytic Function of Undecaprenyl Diphosphate Synthase of Micrococcus luteus B-P 26^1
- 27aV-7 3Dイジング模型のKramers-Wannier近似
- 25pTE-1 双曲の イジングモデル 相転移 けふも調べて 熱力語る(25pTE 古典フラストレート系・古典スピン系一般,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- 25aTF-8 双曲変形の量子スピン鎖への応用 : 励起エネルギーにおけるスケール則(25aTF 量子スピン系,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
- Gene cloning and biochemical characterization of a catalase from Gluconobacter oxydans(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- 密度行列繰り込み群と幾つかの変分原理 (繰り込み群の数理科学での応用)
- 29a-YH-12 2個のS=1/2スピンと2個のS=1スピンが交互に並んでいる量子スピン鎖の基底状態
- 29p-YH-11 2個のS=1/2スピンと2個のS=1スピンが交互に並んでいる量子スピン鎖の熱力学
- S=1/2ハイゼンベルグ鎖における, 相互作用間の競合が強い場合のスピン流体・ダイマー転移 II
- 28a-PS-51 S=1/2ハイゼンベルグ鎖における, 相互作用間の競合が強い場合のスピン流体・ダイマー転移
- 27p-PS-2 量子スピン系に対する数値対角化法の新アルゴリズム
- 22aWE-12 『密度行列を作って対角化』でいいのだろうか?
- 2次元量子スピン系基底状態のテンソル積変分による評価(新奇な秩序を持つ系での相転移,研究会報告)
- 密度行列繰り込み群 (繰り込み群の数理科学での応用)
- 17aRD-5 テンソル型変分関数でポッツポッツ計算
- 密度行列繰り込み群
- 29p-YH-6 密度行列繰り込み群を量子群でグングン加速しよう
- エネルギー・スケール変調による量子系の境界条件・トポロジーの制御(最近の研究から)
- Quantitative analyses of the behavior of exogenously added bacteria during an acidulocomposting process(ENVIRONMENTAL BIOTECHNOLOGY)
- 22aZ-12 3D古典系をCTMRGでボチボチ計算
- Catalytic removal of acetaldehyde in saliva by a Gluconobacter strain(MICROBIAL PHYSIOLOGY AND BIOTECHNOLOGY)
- エネルギー・スケール変調による量子系の境界条件・トポロジーの制御
- Purification, characterization, and primary structure of a novel N-acyl-D-amino acid amidohydrolase from Microbacterium natoriense TNJL143-2(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)
- Purification, characterization, and primary structure of a novel N-acyl-D-amino acid amidohydrolase from Microbacterium natoriense TNJL143-2