The Effect of Protozoa on the Composition of Rumen Bacteria in Cattle Using 16S rRNA Gene Clone Libraries
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概要
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The effect of the presence of protozoa on the composition of rumen bacteria was investigated in cattle. Seven castrated Holstein cattle were divided into two groups: four faunated and three unfaunated, and 16S ribosomal RNA gene (rDNA) clonal libraries were constructed. A total of 312 clones were sequenced across 1,500 bp. The 151 sequences of the faunated cattle were classified into 98 operational taxonomic units (OTUs) having at least 97% similarity. The sequences derived from the faunated cattle were classified into Firmicutes (59.7%), Bacteroidetes (34.4%), Spirochaetes (2.6%), Actinobacteria (2.0%), and Proteobacteria (1.3%). Bacteroides and Prevotella (34.4%) were the major groups in the faunated cattle. The 161 sequences in the unfaunated cattle were classified into 72 OTUs. The sequences derived from the unfaunated libraries were classified into Firmicutes (65.7%), Bacteroidetes (31.1%), Proteobacteria (1.9%), and Spirochaetes (1.2%). The Clostridium botulinum group and its relatives (36.0%) were the major groups in the unfaunated cattle.An analysis by the computer program LIBSHUFF clarified that the presence of ruminal protozoa markedly affected the composition of rumen bacteria.
- 社団法人 日本農芸化学会の論文
- 2005-03-23
著者
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田島 清
畜草研
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Ozutsumi Yuhei
United Graduate School Of Agricultural Science Tokyo University Of Agriculture And Technology
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TAJIMA Kiyoshi
National Institute of Livestock and Grassland Science
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TAKENAKA Akio
National Institute of Livestock and Grassland Science
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ITABASHI Hisao
United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology
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竹中 昭雄
農業・食品産業技術総合研究機構畜産草地研究所
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Takenaka A
National Institute Of Livestock And Grassland Science
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Tajima Kiyoshi
Division Of Biomaterials Department Of Oral Functional Reconstruction Kyushu Dental Collage
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田島 清
National Institute Of Livestock And Grassland Science
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Itabashi Hisao
United Graduate School Of Agriculture Tokyo University Of Agriculture And Technology
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Itabashi Hisao
東京農工大学 農学部
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Itabashi Hisao
United Graduate School Of Agricultural Sci. Tokyo Univ. Of Agriculture And Technol.
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Itabashi H
United Graduate School Of Agricultural Science Tokyo University Of Agriculture And Technology
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Itabashi Hisao
Department Of Animal Physiology National Institute Of Animal Industry
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Itabashi Hisao
Faculty Of Agriculture Tokyo University Of Agriculture And Technology
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竹中 昭雄
畜産草地研究所
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竹中 昭雄
National Institute Of Livestock And Grassland Science
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Tajima K
Division Of Biomaterials Department Of Oral Functional Reconstruction Kyushu Dental Collage
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Tajima Kiyoshi
Faculty Of Regional Environmental Science Tokyo University Of Agriculture
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Takenaka A
Graduate School Of Bioscience And Biotechnology Tokyo Institute Of Technology
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Takenaka Akio
Department Of Life Science Faculty Of Bioscience And Biotechnology Tokyo Institute Of Tdechnology
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Ozutsumi Yuhei
東京農工大学 連合農学研究科
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Takenaka Akio
National Inst. Environmental Studies Ibaraki Jpn
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