Succession and Phylogenetic Profile of Methanogenic Archaeal Communities during the Composting Process of Rice Straw Estimated by PCR-DGGE Analysis(Soil Biology)

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概要

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• The succession and phylogenetic profile of methanogenic archaeal communities for rice straw (RS) in the composting process were studied by polymerase-chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) analysis followed by sequencing. Three groups of DGGE bands of methanogenic archaeal communities appeared successively in the present composting process. The first group of DGGE bands characterized the communities that were probably associated with soil contamination and survived during the early stage of composting. The second and the third groups of DGGE bands characterized the communities that proliferated and played a role in the anaerobic decomposition of RS during the middle and curing stages. Methanogenic archaeal communities were detected at every stage of rice straw composting except for one sampling time on day 14 at the end of the thermophilic stage. Among the 12 sequenced DGGE bands, 7 bands corresponded to Methanomicrobiales, 4 bands to novel uncultured euryarchaeota belonging to "Rice Cluster I," and one band to Methanosarcinales. Two DGGE bands which appeared from day 28 of the second temperature peak (48℃) to the end of composting corresponded to the thermophilic strain of Methanoculleus thermophilus CR-1. Six bands corresponded to the methanogens that originated from paddy field soils, which indicated that methanogens in RS compost were derived mainly from rice fields.

• 社団法人日本土壌肥料学会の論文

著者

• KIMURA Makoto

  Graduate School of Bioagricultural Sciences, Nagoya University

• 木村 真人

  Laboratory Of Soil Biology And Chemistry School Of Agricultural Sciences Nagoya University

• Kimura Makoto

  Nagoya Univ. Aichi Jpn

• Asakawa S

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Asakawa Susumu

  Graduate School Of Bioagricultural Sciences Nagoya University

• Asakawa S

  Kyushu National Agricultural Experiment Station

• Cahyani V

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Cahyani Vita

  名大院生命農学

• CAHYANI Vita

  Graduate School of Bioagricultural Sciences, Nagoya University

• Matsuya Kazuo

  Laboratory of Crop Science, Aichi-ken Anjo Research and Extension Center

• Matsuya Kazuo

  Aichi-ken Anjo Research and Extension Center

• Matsuya Kazuo

  Study Program of Soil Science, Faculty of Agriculture, Sebelas Maret University

• Asakawa Susumu

  Aichi-ken Anjo Research and Extension Center

• Katoh Masahiko

  Graduate School Of Bioagricultural Sciences Nagoya University:(present Address)zen-noh Agricultural

• Kimura M

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Kimura M

  School Of Agriculture Nagoya University

• Mtsuya Kazuo

  Laboratory Of Crop Science Aichi-ken Anjo Research And Extension Center

• Matsuya Kazuo

  Laboratory Of Crop Science Aichi-ken Anjo Research And Extension Center

• Kimura Makoto

  Graduate School Of Bioagricultural Sciences Nagoya University

• Kimura Makoto

  Graduate School Of Agricultural Sciences Nagoya University

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