Bacterial communities in iron mottles in the plow pan layer in a Japanese rice field : Estimation using PCR-DGGE and sequencing analyses(Soil Biology)

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概要

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• Bacterial communities in iron (Fe) mottles in the plow pan layer in a Japanese rice field were estimated using polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) analysis targeting 16S rDNA genes. The DGGE band patterns indicate that distinct bacterial communities with lower diversity inhabit Fe mottles compared with the reference soil matrix. Many of the DGGE bands of the Fe mottles that were sequenced (12 of 29 DGGE bands) were closely related to bacteria involved with Fe oxidation and reduction: Siderooxidans ghiorsii, Azoarcus sp., Azovibrio sp., Dechloromonas sp., Acidimicrobium ferrooxidans, Geobacter psychrophilus, Clostridium sp., Desulfovibrio sp. and Desulfonatronum cooperativum. The results suggest that specific bacteria inhabit Fe mottles and may play a role in the Fe cycle.

• 社団法人日本土壌肥料学会の論文

著者

• KIMURA Makoto

  Graduate School of Bioagricultural Sciences, Nagoya University

• 木村 真人

  Laboratory Of Soil Biology And Chemistry School Of Agricultural Sciences Nagoya University

• 木村 眞人

  名大農

• Asakawa Susumu

  Graduate School of Bioagricultural Sciences, Nagoya University

• Asakawa Susumu

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bio-agricultural Sciences Nagoya Univers

• Kimura Makoto

  Nagoya Univ. Aichi Jpn

• Asakawa Susumu

  Nagoya Univ. Nagoya Jpn

• Asakawa S

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Asakawa Susumu

  Graduate School Of Bioagricultural Sciences Nagoya University

• Asakawa S

  Kyushu National Agricultural Experiment Station

• Cahyani V

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Cahyani Vita

  名大院生命農学

• CAHYANI Vita

  Graduate School of Bioagricultural Sciences, Nagoya University

• MURASE Jun

  Graduate School of Bioagricultural Sciences, Nagoya University

• IKEDA Akihiro

  Aichi-ken Agricultural Research Center

• TAKI Katsutoshi

  Aichi-ken Agricultural Research Center

• Katoh Masahiko

  Graduate School Of Bioagricultural Sciences Nagoya University:(present Address)zen-noh Agricultural

• Kimura M

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Kimura Makoto

  School Of Agriculture Nagoya University

• Kimura M

  School Of Agriculture Nagoya University

• Murase Jun

  Graduate School Of Bioagricultural Sciences Nagoya University

• Murase J

  Graduate School Of Bioagricultural Sciences Nagoya University

• Murase J

  Nagoya Univ. Nagoya Jpn

• Kimura Makoto

  Graduate School Of Bioagricultural Sciences Nagoya University

• Kimura Makoto

  Laboratory Of Soil Biology And Chemistry Graduate School Of Bioagricultural Sciences Nagoya Universi

• Kimura Makoto

  Graduate School Of Agricultural Sciences Nagoya University

• Murase Jun

  Graduate School of Bioagricultural Science, Nagoya University

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