Divergent Structures of Carbazole Degradative car Operons Isolated from Gram-negative Bacteria

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概要

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• Southern hybridization analysis of the genomes from the newly-isolated 10 carbazole (CAR)-utilizing bacteria revealed that 8 of the isolates carried gene clusters homologous to the CAR-catabolic car operon of Pseudomonas resinovorans strain CA10. Sequencing analysis showed that two car operons and the neighboring regions of Pseudomonas sp. strain K23 are nearly identical to that of strain CA10. In contrast to strains CA10 and K23, carEF genes did not exist downstream of the car gene cluster of Janthinobacterium sp. strain J3. In the car gene clusters, strains CA10, K23 and J3 have Rieske-type ferredoxin as a component of carbazole dioxygenase, although Sphingomonas sp. strain KA1 possesses a putidaredoxin-type ferredoxin. We confirmed that this putidaredoxin-type ferredoxin CarAc can function as an electron mediator to CarAa of strain KA1. In the upstream regions of the carJ3 and carKA1 gene clusters, ORFs whose deduced amino acid sequences showed homology to GntR-family transcriptional regulators were identified.

• 社団法人 日本農芸化学会の論文
• 2004-07-23

著者

• Yoshida Toshiomi

  大阪大学生物工学国際交流センター

• Yoshida Toshiomi

  International Center Of Cooperative Research In Biotechnology Faculty Of Engineering Osaka Universit

• Yoshida T

  International Center For Biotechnology Osaka University

• 吉田 豊和

  岐阜大・工・生命工

• NOJIRI Hideaki

  Biotechnology Research Center, The University of Tokyo

• OMORI TOSHIO

  Biotechnology Research Center, The University of Tokyo

• Omori T

  Coll. Of Systems Engineering And Sci. Dep. Of Bioscience And Engineering Shibaura Inst. Of Technol.

• HABE HIROSHI

  Biotechnology Research Center, The University of Tokyo

• URATA Masaaki

  Biotechnology Research Center, University of Tokyo

• INOUE Kengo

  Biotechnology Research Center, The University of Tokyo

• WIDADA Jaka

  Biotechnology Research Center, The University of Tokyo

• NAKAI Seiichiro

  Biotechnology Research Center, The University of Tokyo

• ENDOH Takayuki

  Biotechnology Research Center, The University of Tokyo

• ASHIKAWA Yuji

  Biotechnology Research Center, The University of Tokyo

• SHINTANI Masaki

  Biotechnology Research Center, The University of Tokyo

• SAIKI Yuko

  Biotechnology Research Center, The University of Tokyo

• YOSHIDA Takako

  Biotechnology Research Center, The University of Tokyo

• Ashikawa Yuji

  Structural Physiology Research Group, RIKEN Harima Institute SPring-8 Center

• Omori Toshio

  Biotechnoiogy Researchcenter The University Of Tokyo

• Yoshida T

  Division Of Material And Biological Graduate School Japan Women's University

• Nojiri H

  Biotechnology Res. Center The Univ. Of Tokyo

• Noguchi Haruko

  Biotechnology Research Center The University Of Tokyo

• Nojiri Hideaki

  Biotechnology Res. Center The Univ. Of Tokyo

• Yoshida T

  Kinki Univ. Nara Jpn

• Yoshida Toyokazu

  Dept. Food Nutri. Fac. Agr. Kinki Univ.

• Saiki Yuko

  Biotechnology Research Center The University Of Tokyo

• Inoue Kengo

  Biotechnology Research Center The University Of Tokyo

• Widada Jaka

  Biotechnology Research Center The University Of Tokyo

• Habe Hiroshi

  Biotechnology Research Center University Of Tokyo

• Urata Masaaki

  Biotechnology Research Center The University Of Tokyo

• Ashikawa Yuji

  Structural Physiology Research Group Riken Harima Institute Spring-8 Center

• Endoh Takayuki

  Biotechnology Res. Center The Univ. Of Tokyo

• Shimura Minoru

  Environmental Biotechnology Lab. Railway Technical Res. Inst.

• Habe H

  Research Institute For Innovations In Sustainable Chemistry National Institute Of Advanced Industria

• Nakai Seiichiro

  Biotechnology Research Center The University Of Tokyo

• 吉田 豊和

  岐阜大 工

• Omori Toshio

  Shibaura Institute Of Technology

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