Molecular Genetic Analysis of Reovirus Isolated in Korea.
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概要
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Reovirus isolates from human, striped-field mouse (Apodemus agrarius) and Korean field mouse (A. peninsulae) in Korea showed extensive variability in the patterns of electrophoretic migration of the double-stranded RNA (dsRNA) genome segments. Hemagglutination inhibition (HI) test was performed for serotype determination of 12 reovirus isolates. To clarify genetic diversity and molecular phylogeny of Korean reoviruses, L1, S3 and S4 genomic segments of reoviruses were amplified by RT-PCR and directly sequenced. Among 12 reovirus strains, 9 strains were type 3 and 3 strains were type 2. The L1 was highly conserved showing 91.5-100%, 94.7-100% similar ities among Korean isolates, and 77.5-97.9%, 92.6-96.8% similarities compared to other reference strains of each genotypes at nucleotide and amino acid levels, respectively. In S3 and S4 segments, 84.4-99.3%, 72.3-99% nucleotide sequence similarities and 92-99.3%, 89.1-98.4% amino acid sequence similarities among Korean isolates were observed, and 70.8-93.9%, 72.3-98.7% nucleotide sequence similarities and 81.8-100%, 88.3-97.7% amino acid sequence similarities compared with other reference strains of each genotype were observed, respectively. Phylogenetic analyses based on the S3 and S4 nucleotide sequences indicate that genotypes of reovirus are more related with geographic differences rather than host species or date of isolation.
- 久留米大学医学部 The Kurume Medical Journal 編集部の論文
著者
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Song Ki-joon
Department Of Microbiology College Of Medicine Korea University
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Lee Young
Department Of Aerospace Information Engineering The Konkuk University
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Song Jin-won
Department Of Microbiology College Of Medicine Korea University
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Baek Luck
Department Of Microbiology College Of Medicine Korea University
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Lee Jae
Department Of Acupuncture & Moxibustion College Of Oriental Medicine
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Kim Jong
Department Of Agricultural Bio-resources National Academy Of Agricultural Science Rural Development
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Park Kwang
Department Of Chemical Engineering And Polymer Technology Institute Sungkyunkwan University
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KIM Sang
Department of Anesthesiology and Pain Medicine, Chosun University Medical School
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SONG KI-JOON
Department of Microbiology, College of Medicine
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SHIROUZU KAZUO
Korea and Department of Surgery, Kurume University School of Medicine
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PARK KWANG
Department of Microbiology, College of Medicine
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LEE JAE
Department of General Surgery, Korea University Guro Hospital
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SONG JIN-WON
Department of Microbiology, College of Medicine
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KIM SANG
Department of Microbiology, College of Medicine
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BAEK LUCK
Department of Microbiology, College of Medicine
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LEE YOUNG
Department of Microbiology, College of Medicine
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