The DNA-binding domain of feast/famine regulatory protein, FFRP
スポンサーリンク
概要
- 論文の詳細を見る
Using genomic sequences, gene Bs0711124 of the eubacterium Bacillus subtilis and other archaeal genes including lrs14 of Sulfolobus solfataricus have been identified as coding the N-terminal half of the feast/famine regulatory protein in the full-length (fl-FFRP). This half composes an independent domain, which is able to bind DNA. By comparing the amino acid sequences of the N-terminal DNA-binding domains of fl-FFRPs and of the newly identified group of half FFRPs, and by analyzing the 3D structures of fl-FFRPs previously reported, it has been predicted that the third α-helix in a domain of this type will recognize the nucleotide sequence by binding to DNA.(Communicated by Masanori OTSUKA, M. J. A., March 12, 2003)
- 日本学士院の論文
著者
-
Suzuki M
National Inst. Advanced Industrial Sci. And Technol. (aist) Ibaraki Jpn
-
Suzuki Masashi
National Institute Of Advanced Industrial Science And Technology
-
Koike Hideaki
National Institute of Advanced Industrial Science and Technology (AIST)
-
AMANO Naoki
National Institute of Advanced Industrial Science and Technology (AIST)
-
Koike H
National Inst. Advanced Industrial Sci. And Technol. Ibaraki Jpn
関連論文
- An electron microscopic study of the archaeal feast/famine regulatory protein : 2. Crystal formation by a full length FFRP, pot0434017 (FL11)
- An electron microscopic study of the archaeal feast/famine regulatory protein : 3. Labeling of the N-terminus using nickel
- An electron microscopic study of the archaeal feast/famine regulatory protein : 7. Single particles formed by pot0434017
- An electron microscopic study of the archaeal feast/famine regulatory protein : 4. Estimation of the particle size
- An electron microscopic study of the archaeal feast/famine regulatory protein : 5. Fourier filtration of images
- An electron microscopic study of the archaeal feast/famine regulatory protein : 6. The cylindrical assembly form
- The DNA-binding domain of feast/famine regulatory protein, FFRP
- Identification of promoter sequences using archaeal genomic sequences
- Structure and function of the feast/famine regulatory proteins, FFRPs
- Feast/famine regulatory proteins of a multiple drug resistant, Pseudomonas aeruginosa
- Binding of the feast/famine regulatory protein (FFRP) FL11 (pot0434017) to DNA in the "promoter to coding" region of gene fl11
- Transcription Regulation by Feast/Famine Regulatory Proteins, FFRPs, in Archaea and Eubacteria
- Identification of promoter sequences using archaeal genomic sequences : 2. Analysis of a meso-thermophile, Thermoplasma volcanium
- Effects of amino acids on assembling of an archaeal feast/famine regulatory protein, DM1 (pot1216151)
- Light scattering from assemblies of an archaeal feast/famine regulatory protein, DM1 (pot1216151)
- GATC Methylation by Dam methylase in archaea: its roles and possible transcription regulation by an FFRP
- Enzymes identified using genomic DNA sequences suggest some atypical characteristics of de novo biosynthesis of purines in archaebacteria
- Archaebacterial ribosome is a chimera of eubacterial-type RNAs and eukaryotic-type proteins.
- Distribution and orientation of genes in the genome of Pyrococcus OT3
- Prophages inserted in archaebacterial genomes
- Comparison of archaebacterial central metabolic pathways using the genomic DNA sequences
- Identification of genes in the complete genomic DNA sequence of a hyper-thermophilic archaeon, Pyrococcus sp. OT3
- Analysis of Rate-determining Factors in the Oxidative Reaction of Monolignols by Peroxidase-H2O2 System
- Visual presentation of complete genomic DNA sequences, and its application to identification of gene-coding regions
- Informatic identification of blocks of ordered nucleotide sequences in human chromosome 22
- Comparison of pathways for amino acid biosynthesis in archaebacteria using their genomic DNA sequences
- Orthologous and paralogous FFRPs in E. coli and related proteobacteria
- A SELEX study of the DNA-binding specificity of archaeal FFRPs:2. FL4 (pot1613368)
- A SELEX study of the DNA-binding specificity of archaeal FFRPs: FL10 (pot0377090, LrpA)
- Identification of proteins present in the archaeon Thermoplasma volcanium cultured in aerobic or anaerobic conditions
- Visual representation of the complete genomic DNA sequence of the thermophilic archaeon Thermoplasma volcanium
- Localization of A:T and G:C basepairs in genomes of higher eukaryotes
- Nucleotide sequences of the plastid and nuclear chromosome I of the unicellular red alga Cyanidioschyzon merolae
- Formation of thymine clusters in genomes of higher eukaryotes
- Comparison of foot-prints of FFRPs on promoters designed for autoregulation: FL10 (pot0377090, LrpA), FL11 (pot0434017), and Ss/Sa-Lrp
- Characteristics of DNA superstructures formed upon interaction with feast/famine regulatory proteins, FFRPs
- An electron microscopic study of the archaeal feast/famine regulatory protein
- A possible disk to cylinder transition of assemblies of feast/famine regulatory proteins, FFRPs
- The DNA-binding specificity of eubacterial and archaeal FFRPs