Visual representation of the complete genomic DNA sequence of the thermophilic archaeon Thermoplasma volcanium
スポンサーリンク
概要
- 論文の詳細を見る
The complete genomic DNA sequence of the thermophilic archaeon Thermoplasma volcanium is visually represented by assembling micro-squares in four color-types. The number of bases in this sequence (1,584,804) is larger than what was reported earlier (1,584,799 in Kawashima, T., Yamamoto, Y., Aramaki, H., Nunoshiba, T., Kawamoto, T. et al., 1999, Proc. Japan Acad. 75B, 213-218) by 5. These five bases (A at position 320,375, C at 342,507, T at 1,182,809, A at 1,365,060, and C at 1,376,292 in the new version) are missing from the previous version, mainly, not because of erroneous sequence reading, but due to physical deletion of corresponding base-pairs upon replication of the cloned DNA fragments in E. coli cells.(Communicated by Masanori OTSUKA, M. J. A., Jan. 14, 2003)
- 日本学士院の論文
著者
-
Suzuki Masashi
National Institute Of Advanced Industrial Science And Technology
-
Koike Hideaki
National Institute of Advanced Industrial Science and Technology (AIST)
-
AMANO Naoki
National Institute of Advanced Industrial Science and Technology (AIST)
-
EBIHARA Sonomi
National Institute of Advanced Industrial Science and Technology (AIST)
-
KAWASHIMA Tsuyoshi
National Institute of Advanced Industrial Science and Technology
-
MINEZAKI Yoshiaki
National Institute of Advanced Industrial Science and Technology (AIST), AIST Tsukuba Center
-
Kawashima T
National Institute Of Advanced Industrial Science And Technology:japan Science And Technology Agency
-
SUZUKI Yohko
National Institute of Advanced Industrial Science and Technology (AIST)
-
SUZUKI Keiko
National Institute of Advanced Industrial Science and Technology (AIST)
-
Minezaki Yoshiaki
National Inst. Genetics
-
KAWASHIMA Tsuyoshi
National Institute of Advanced Industrial Science and Technology (AIST)
-
MINEZAKI Yoshiaki
National Institute of Advanced Industrial Science and Technology (AIST)
関連論文
- An electron microscopic study of the archaeal feast/famine regulatory protein : 2. Crystal formation by a full length FFRP, pot0434017 (FL11)
- An electron microscopic study of the archaeal feast/famine regulatory protein : 3. Labeling of the N-terminus using nickel
- An electron microscopic study of the archaeal feast/famine regulatory protein : 7. Single particles formed by pot0434017
- An electron microscopic study of the archaeal feast/famine regulatory protein : 4. Estimation of the particle size
- An electron microscopic study of the archaeal feast/famine regulatory protein : 5. Fourier filtration of images
- An electron microscopic study of the archaeal feast/famine regulatory protein : 6. The cylindrical assembly form
- The DNA-binding domain of feast/famine regulatory protein, FFRP
- Identification of promoter sequences using archaeal genomic sequences
- Structure and function of the feast/famine regulatory proteins, FFRPs
- Feast/famine regulatory proteins of a multiple drug resistant, Pseudomonas aeruginosa
- Binding of the feast/famine regulatory protein (FFRP) FL11 (pot0434017) to DNA in the "promoter to coding" region of gene fl11
- Transcription Regulation by Feast/Famine Regulatory Proteins, FFRPs, in Archaea and Eubacteria
- Identification of promoter sequences using archaeal genomic sequences : 2. Analysis of a meso-thermophile, Thermoplasma volcanium
- Effects of amino acids on assembling of an archaeal feast/famine regulatory protein, DM1 (pot1216151)
- Light scattering from assemblies of an archaeal feast/famine regulatory protein, DM1 (pot1216151)
- GATC Methylation by Dam methylase in archaea: its roles and possible transcription regulation by an FFRP
- Enzymes identified using genomic DNA sequences suggest some atypical characteristics of de novo biosynthesis of purines in archaebacteria
- Comparison of archaebacterial central metabolic pathways using the genomic DNA sequences
- Informatic identification of blocks of ordered nucleotide sequences in human chromosome 22
- Comparison of pathways for amino acid biosynthesis in archaebacteria using their genomic DNA sequences
- Orthologous and paralogous FFRPs in E. coli and related proteobacteria
- A SELEX study of the DNA-binding specificity of archaeal FFRPs:2. FL4 (pot1613368)
- A SELEX study of the DNA-binding specificity of archaeal FFRPs: FL10 (pot0377090, LrpA)
- Identification of proteins present in the archaeon Thermoplasma volcanium cultured in aerobic or anaerobic conditions
- Visual representation of the complete genomic DNA sequence of the thermophilic archaeon Thermoplasma volcanium
- Localization of A:T and G:C basepairs in genomes of higher eukaryotes
- Nucleotide sequences of the plastid and nuclear chromosome I of the unicellular red alga Cyanidioschyzon merolae
- Formation of thymine clusters in genomes of higher eukaryotes
- Determination of the complete genomic DNA sequence of Thermoplasma volcanium GSS1
- Comparison of foot-prints of FFRPs on promoters designed for autoregulation: FL10 (pot0377090, LrpA), FL11 (pot0434017), and Ss/Sa-Lrp
- Characteristics of DNA superstructures formed upon interaction with feast/famine regulatory proteins, FFRPs
- An electron microscopic study of the archaeal feast/famine regulatory protein
- A possible disk to cylinder transition of assemblies of feast/famine regulatory proteins, FFRPs
- The DNA-binding specificity of eubacterial and archaeal FFRPs