Analysis of Ammonia Monooxygenase and Archaeal 16S rRNA Gene Fragments in Nitrifying Acid-Sulfate Soil Microcosms
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概要
- 論文の詳細を見る
The present study describes the occurrence of a unique archaeal ammonia monooxygenase alpha subunit (amoA) gene in nitrifying acid-sulfate soil microcosms at pH 3.5. The soil was collected from an abandoned paddy field in Thailand. Microcosms were incubated in the dark at 30°C for 372 days with the following three treatments: addition of ammonium sulfate solution once a month (I) or once a week (II), and addition of only sterilized water (III). A quantitative PCR analysis revealed an increase in abundance of the archaeal amoA gene in microcosm soils in which nitrate concentrations increased after incubation. A phylogenetic analysis indicated a predominance of the novel gene, and a predominance of a betaproteobacterial amoA gene affiliated with the genus Nitrosospira. A 16S rRNA gene-based PCR assay revealed that crenarchaeotic Group I.1d was predominant among the Crenarchaeota in microcosms. These results suggest the presence of ammonia-oxidizing archaea corresponding to the unique amoA lineage in nitrifying acid-sulfate soil microcosms at pH 3.5.
- 日本微生物生態学会・日本土壌微生物学会の論文
- 2009-06-01
著者
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ONODERA YUKI
Graduate School of Bioresource Sciences, Nihon University
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NAKAGAWA TATSUNORI
College of Bioresource Sciences, Nihon University
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TAKAHASHI REIJI
College of Bioresource Sciences, Nihon University
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TOKUYAMA TATSUAKI
College of Bioresource Sciences, Nihon University
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Tanaka Tomohiro
Department Of Agricultural And Biological Chemistry College Of Bioresource Sciences Nihon University
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Onodera Yuki
Graduate School Of Bioresource Sciences Nihon University
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SASAKI Satohiko
Advanced Research Institute, Nihon University
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Satoh Kazuo
Graduate School Of Bioresource Science Nihon University
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NAKAYA ASAMI
Graduate School of Bioresource Science, Nihon University
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Nakaya Asami
Graduate School Of Bioresource Science Nihon University
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Takahashi Reiji
College Of Bioresource Sciences Nihon University
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Tokuyama Tatsuaki
College Of Bioresource Sciences Nihon University
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Nakagawa Tatsunori
College Of Bioresource Sciences Nihon University
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Sasaki Satohiko
Advanced Research Institute Nihon University
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Tokuyama T
College Of Bioresource Sciences Nihon University
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Tanaka Tomohiro
College Of Bioresource Sciences Nihon University
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Satoh Kazuo
Graduate School Of Bio-applications And Systems Engineering Tokyo University Of Agriculture And Technology
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