An integrated database of the ascidian, Ciona intestinalis: Towards functional genomics

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概要

• 論文の詳細を見る

• An integrated genome database is essential for future studies of functional genomics. In this study, we update cDNA and genomic resources of the ascidian, Ciona intestinalis, and provide an integrated database of the genomic and cDNA data by extending a database published previously. The updated resources include over 190,000 ESTs (672,396 in total together with the previous ESTs) and over 1,000 full-insert sequences (6,773 in total). In addition, results of mapping information of the determined scaffolds onto chromosomes, ESTs from a full-length enriched cDNA library for indication of precise 5'-ends of genes, and comparisons of SNPs and indels among different individuals are integrated into this database, all of these results being reported recently. These advances continue to increase the utility of Ciona intestinalis as a model organism whilst the integrated database will be useful for researchers in comparative and evolutionary genomics.

• 社団法人日本動物学会の論文
• 2005-08-25

著者

• KAWASHIMA Takeshi

  Department of Mechanical Engineering, Kanagawa Institute of Technology

• KAWADA Tsuyoshi

  Suntory Institute for Bioorganic Research

• SATOH Nori

  Department of Zoology, Graduate School of Science, Kyoto University

• Satoh N

  Department Of Zoology Graduate School Of Science Kyoto University

• Satoh Nori

  Okinawa Inst. Sci. And Technol. Promotion Corp. Okinawa Jpn

• Nakayama Akie

  Department of Biology, Graduate School of Science, Osaka University Toyonaka

• Shoguchi Eiichi

  CREST, Japan Science and Technology Agency

• Satou Yutaka

  Department of Zoology, Graduate School of Science, Kyoto University

• Satoh Nori

  Departmant Of Zoology Graduate School Of Science Kyoto University

• Satou Y

  Department Of Zoology Graduate School Of Science Kyoto University

• Satou Yutaka

  Department Of Zoology Graduate School Of Science Kyoto University

• Nakayama Akie

  Department Of Biology Graduate School Of Science Osaka University Toyonaka:department Of Zoology Gra

• Shoguchi E

  Department Of Zoology Graduate School Of Science Kyoto University

• Shoguchi Eiichi

  Crest Japan Science And Technology Agency:department Of Zoology Graduate School Of Science Kyoto Uni

• Kawashima Takeshi

  Department Of Mechanical Engineering Faculty Of Science And Technology Keio University

• Kawashima Takeshi

  Department Of Chemistry Shool Of Hygienic Sciences Kitasato University

• Satou Yutaka

  Department Of Zoology Faculty Of Science Kyoto University

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