GP-Based Method for Extracting Exons from DNA Sequence
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概要
- 論文の詳細を見る
Abstract This paper describes GP-based method for extracting exons from DNA sequences. The advantage of GP method is automatically to build a proper model for identification. We made experiments to identify the edges of exon (exon-intron boundary and intron-exon boundary) in DNA sequences and compare the average identification rate by GP method with that by conventional methods (Genscan, HMMgene, Genie, FGENES, Morgan, GeneMark.hmm and MZEF) with data set 'HMR195'. As for exon-intron boundary, GP method is superior to all the conventional methods and as for intron-exon boundary, GP method is superior to almost all the conventional methods except Genscan.
- 宮崎大学の論文
著者
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Ohta Kakehiro
Graduate School Of Engineering University Of Miyazaki
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YASUNAGA Moritoshi
Graduate School of Systems and Information Engineering, University of Tsukuba
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Yoshihara Ikuo
Department of Computer Science and Systems Engineering, Faculty of Engineering, Miyazaki University
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Yamamori Kunihito
Department of Computer Science and Systems Engineering, Faculty of Engineering, Miyazaki University
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Yasunaga Moritoshi
Institute of Information Sciences and Electronics, Tsukuba University
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Yasunaga Moritoshi
Graduate School Of Systems And Information Engineering University Of Tsukuba
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Yasunaga Moritoshi
Institute Of Information Sciences And Electronics Tsukuba University
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Yasunaga Moritoshi
The Institute Of Information Sciences And Electronics University Of Tsukuba
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Yasunaga Moritoshi
Institute Of Information Science And Electronics University Of Tsukuba
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Ohta Takehiro
Department Of Orthopedic Surgery Nagoya Memorial Hospital
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Yoshihara Ikuo
Department Of Computer And Science And Systems Engineering Miyazaki University
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Ohta Kakehiro
Department of Computer Science and Systems Engineering, Graduate School of Engineering, Miyazaki Uni
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Kamimai Yoshiyuki
Faculty Of Engineering University Of Miyazaki
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Yamamori Kunihito
Department Of Computer And Science And Systems Engineering Miyazaki University
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Ohta Kouji
Department Of Computer Science And Systems Engineering Faculty Of Engineering Miyazaki University
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