Collaborative proteomics framework with XML databases and an integrated XML viewer for 2DPAGE
スポンサーリンク
概要
- 論文の詳細を見る
We developed a collaborative proteomics framework with XML-based 2DPAGE database and XML viewer optimized for the proteome database. Prior to the development of the framework, we optimized the XML format of our TMIG-XML-2DPAGE database for efficient data sharing in a collaborative research community. The data format is comprised with 2 layers of 2-D gel map and spot protein information. The function of clickable imagemap for representing spot protein information is available both in the proteome data management system with PHP and in the XML viewer with Object Pascal. Individual spots on an experimental 2-D gel image are easily matched to corresponding spots on a standard 2-D gel map in the TMIG-XML-2DPAGE database using the function of the XML viewer.
- 2005-03-01
著者
-
Toda Tosifusa
Research Team for Mechanism of Aging, Tokyo Metropolitan Institute of Gerontology
-
Toda Tosifusa
Proteomics Collaboration Research Group Tokyo Metropolitan Institute Of Gerontology
-
Toda Tosifusa
Proteomics Collaboration Center Tokyo Metropolitan Institute Of Gerontology
-
MORISAWA Hiraku
Proteomics Collaboration Research Group, Tokyo Metropolitan Institute of Gerontology
-
HISATOMI Hisashi
Proteomics Collaboration Research Group, Tokyo Metropolitan Institute of Gerontology
-
HIROTA Mikako
Proteomics Collaboration Research Group, Tokyo Metropolitan Institute of Gerontology
-
Hirota Mikako
Research Team For Molecular Biomarkers Tokyo Metropolitan Institute Of Gerontology
-
Hisatomi Hisashi
Proteomics Collaboration Research Group Tokyo Metropolitan Institute Of Gerontology
-
Morisawa Hiraku
Research Team For Molecular Biomarkers Tokyo Metropolitan Institute Of Gerontology
-
Toda Tosifusa
Research Team For Mechanism Of Aging Tokyo Metropolitan Institute Of Gerontology
関連論文
- Proteomic analysis of two types of exosomes in human whole saliva
- Proteomic Analysis of Two Types of Exosomes in Human Whole Saliva
- CHANGES OF RADIAL SPOKE PROTEIN LRR37 COUPLED WITH THE ACTIVATION OF SPERM MOTILITY IN CIONA INTESTINALIS(Cell Biology and Morphology,Abstracts of papers presented at the 75^ Annual Meeting of the Zoological Society of Japan)
- Comparative proteomics of flotillin-rich Triton X-100-insoluble lipid raft fractions of mitochondria and synaptosome from mouse brain
- Mobility-moment analysis of protein-ligand interactions using a multi-capillary electrophoresis instrument : Competitive affinophoresis of concanavalin A and trypsin
- Proteomic Study on X-irradiation-responsive Proteins and Ageing : Search for Responsible Proteins for Radiation Adaptive Response
- Proteomic identification of oxidative-stress-reporting biomarkers differentially secreted from human neuroblastoma SH-SY5Y cells
- The protein expression profile of cynomolgus monkey embryonic stem cells in two-dimensional gel electrophoresis : a successful identification of multiple proteins using human databases
- Collaborative proteomics framework with XML databases and an integrated XML viewer for 2DPAGE
- Glycoproteomic analysis of abnormal N-glycosylation on the kappa chain of cryocrystalglobulin in a patient of multiple myeloma
- Abnormal N-Glycosylation of the Immunoglobulin G κ Chain in a Multiple Myeloma Patient with Crystalglobulinemia : Case Report
- Proteome analysis of Epstein-Barr virus-transformed B-lymphoblasts and the proteome database
- Searching for Genes Involved in Arteriosclerosis : Proteomic Analysis of Cultured Human Umbilical Vein Endothelial Cells Undergoing Replicative Senescence
- Proteomic approaches to oxidative protein modifications implicated in the mechanism of aging
- A Case Report of Ivermectin-Induced Prolonged Liver Dysfunction in an Elderly Patient with Scabies