Petri Net Based Descriptions for Systematic Understanding of Biological Pathways(<Special Section>Concurrent/Hybrid Systems: Theory and Applications)
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概要
- 論文の詳細を見る
Petri nets have recently become widely accepted as a description method for biological pathways by researchers in computer science as well as those in biology. This paper gives an overview of Petri net formalisms to describe biological pathways and discusses their use in modelings and simulations for the systematic understandings of biological pathways. After reviewing the use of various types of Petri nets for the biological pathway modelings, we showed the examples that analyze fundamental properties of biological pathways using T-invariant, P-invariant, siphon, and trap. Applications of hybrid Petri nets for producing new biological hypotheses through simulations are also illustrated.
- 社団法人電子情報通信学会の論文
- 2006-11-01
著者
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MIYANO Satoru
Human Genome Center, The Institute of Medical Science, University of Tokyo
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Miyano Satoru
Human Genome Center Institute Of Medical Science The University Of Tokyo
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MATSUNO Hiroshi
Graduate School of Science and Engineering, Yamaguchi University
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LI Chen
Graduate School of Science and Engineering, Yamaguchi University
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Matsuno Hiroshi
Graduate School Of Science And Engineering Yamaguchi University
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LI Chen
Human Genome Center, Institute of Medical Science, The University of Tokyo
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Matsuno Hiroshi
Graduate Course Osaka University
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Li Chen
Graduate School of Advanced Sciences of Matter, Hiroshima University
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