Characterization of duplicated two cytosolic phosphoglucose isomerase (PgiC) loci in Arabidopsis halleri ssp. gemmifera
スポンサーリンク
概要
- 論文の詳細を見る
Arabidopsis halleri ssp. gemmifera has two cytosolic phosphoglucose isomerase (PgiC) loci. A 48-bp deletion was observed in the junction of exon 17 and intron 17 for a locus (PgiC2). PCR-RFLP analysis using cDNA template did not detect the PgiC2 locus. Another locus (PgiC1) has common structure with A. thaliana and expressed normally. A phylogenetic tree of PgiC sequences revealed that duplication of the two loci in A. gemmifera occurred after species splitting of A. thaliana and A. gemmifera. More than 12 kb region encompassing PgiC was sequenced for both loci. In both PgiC1 and PgiC2, sequence homologous to A. thaliana PgiC 5 upstream region was not detected. A gene located on chromosome 4 of A. thaliana was detected in the 5 upstream of PgiC2. This result suggested that the microsyntheny around the PgiC region between A. thaliana and A. gemmifera is not established.
- 日本遺伝学会の論文
- 2002-06-25
著者
-
MIYASHITA Naohiko
Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University
-
Kawabe Akira
Laboratory Of Plant Genetics Graduate School Of Agriculture Kyoto University
-
Miyashita Naohiko
Laboratory Of Genetics Faculty Of Agriculture Kyoto University
関連論文
- DNA polymorphism in the blast disease resistance gene Pita of the wild rice Oryza rufipogon and its related species
- DNA polymorphism in the SUPERWOMAN1 (SPW1) locus of the wild rice Oryza rufipogon and its related species
- DNA polymorphism at the ACAULIS5 locus of the wild plant Arabidopsis thaliana
- DNA variation in the metallothionein genes in wild rice Oryza rufipogon: Relationship between DNA sequence polymorphism, codon bias and gene expression
- Polymerase chain reaction -single strand conformational polymorphism analysis of intra- and interspecific variations in organellar DNA regions of Aegilops mutica and related species
- Chromosome-specific satellite sequences in Turritis glabra
- DNA variation in the acidic chitinase locus (ChiA) region in Arabis gemmifera and its related species
- 自家不和合性遺伝子座における対立遺伝子の有効数,ヘテロザイゴシティの期待値および遺伝的距離を推定するための統計的方法〔英文〕
- キイロショウジョウバエのforkedとvermilion遺伝子領域の制限地図多型現象〔英文〕
- Characterization of duplicated two cytosolic phosphoglucose isomerase (PgiC) loci in Arabidopsis halleri ssp. gemmifera
- Phylogenetic relationship among the section Stenophora in the genus Dioscorea based on the analysis of nucleotide sequence variation in the phosphoglucose isomerase(Pgi)locus
- Subfamily divergence in the multigene family of ribulose-1, 5-bisphosphate carboxylase/oxygenase (rbcS) in triticeae and its relatives
- Patterns of codon usage bias in three dicot and four monocot plant species
- Trimorphic DNA variation in the receptor-like protein kinase gene in the F18L15-130 region of the wild plant Arabidopsis thaliana
- Soil bacterial community structure in five tropical forests in Malaysia and one temperate forest in Japan revealed by pyrosequencing analyses of 16S rRNA gene sequence variation
- DNA fingerprinting study on the intraspecific variation and the origin of Prunus yedoensis (Someiyoshino).