Three-dimensional Structure of Microbial 2-Hydroxy1-6-oxo-6-phenylhexa-2, 4-dienoic Acid (HPDA) Hydrolase (BphD Enzyme) from Rhodococcus sp. Strain RHA1, in the PCB Degradation Pathway
スポンサーリンク
概要
- 論文の詳細を見る
The three-dimensional structure of an enzyme, 2-hydroxyl-6-oxo-6-phenylhexa-2, 4-dienoic acid (HPDA) hydrolase (conventionally called BphD) from Rhodococcus sp. strain RHA1 has been solved by X-ray crystal structure analysis. This enzyme hydrolyzes one of the highly reactive intermediates, the meta cleavage product of the reaction catalyzed by 2, 3-dihydroxybiphenyl dioxygenase, in the metabolic pathway degrading biphenyl compounds including the notorious environmental pollutant PCBs (polychlorinated biphenyls). By virtue of this and several other enzymes, the biphenyl compounds including PCBs are finally introduced into the tricarboxylic acid cycle. The BphD enzyme is an oligomeric enzyme made up of eight identical subunits each of 285 amino acid residues. The subunit consists of two domains, α/β domain and α domain, between which the active site is located.
- 日本学士院の論文
著者
-
YAMADA Akihiro
Department of Functional Materials Science, Saitama University
-
Fukuda Masao
Department Of Bioengineering Nagaoka University Of Technology
-
Fukuda Masao
Department Of Agricultural Chemistry Faculty Of Agriculture The University Of Tokyo
-
HATTA TAKASHI
Research Institute of Technology, Okayama University of Science
-
Hatta T
Okayama Univ. Sci. Okayama Jpn
-
Hatta Takashi
Research Institute Of Technology Okayama University Of Science
-
MITSUI Yukio
Department of BioEngineering Nagaoka University of Technology
-
Shimada Teruhiko
Research Institute Of Technology Okayama University Of Science
-
Hirose Toru
Department Of Biological Function And Genetic Resources Science Faculty Of Agriculture Okayama Unive
-
NANDHAGOPAL Narayanasamy
Department of BioEngineering, Nagaoka University of Technology
-
SENDA Toshiya
Department of BioEngineering, Nagaoka University of Technology
-
Yamada Akihiro
Department Of Chemistry Graduate School Of Science
-
YAMADA AKIHIRO
Department of Bioengineering, Nagaoka University of Technology
関連論文
- Identification and Characterization of Carbohydrate Molecules in Mammalian Cells Recognized by Dengue Virus Type 2
- Expression in Escherichia coli of biphenyl 2,3-dioxygenase genes from a gram-positive polychlorinated biphenyl degrader, Rhodococcus jostii RHA1
- Expression in Escherichia coli of Biphenyl 2,3-Dioxygenase Genes from a Gram-Positive Polychlorinated Biphenyl Degrader, Rhodococcus jostii RHA1
- Nucleotide Sequence of the Gene Encoding the 45-Kilodalton Subunit of Alcohol Dehydrogenase from Acetobacter aceti
- Possible Functional Domains in a Quinoprotein Alcohol Dehydrogenase from Acetobacter aceti
- Efficiengt Introduction of Vector Plasmids into Acetic Acid Bacteria
- MHD wave characteristics inferred from correlations between X-rays, VLF, and ULFs at Syowa Station, Antarctica and Tjornes, Iceland (L-6)
- Enzymatic Properties of Terephthalate 1,2-Dioxygenase of Comamonas sp. Strain E6
- Identification of Insertion Sequence from a γ-Hexachlorocyclohexane Degrading Bacterium, Sphingomonas paucimobilis UT26
- Identification of a Unique 2,3-Dihydroxybiphenyl 1 ,2- Dioxygenase in Rhodococcus strain RHA1 containing a bphC1 disruption
- Purification and Characterization of γ-Hexachlorocyclohexane (γ-HCH) Dehydrochlorinase (LinA) from Pseudomonas paucimobilis
- Isolation and Characterization of Tn5-Induced Mutants of Pseudomonas paucimobilis UT26 Defective in γ-Hexachlorocyclohexane Dehydrochlorinase (LinA)
- Degradation of Ethylbenzene by Pseudomonas putida Harboring OCT Plasmid(Biological Chemistry)
- Dehydrochlorination of γ-Hexachlorocyclohexane (γ-BHC) by γ-BHC-Assimilating Pseudomonas paucimobilis(Microbiology & Fermentation Industry)
- Isolation and Characterization of a Mixed Culture That Degrades Polychlorinated Biphenyls(Microbiology & Fermentation Industry)
- Generation of transgenic hybrid aspen that express a bacterial gene for feruloyl-CoA hydratase/lyase (FerB), which is involved in lignin degradation in Sphingomonas paucimobilis SYK-6
- Detection of bphAa Gene Expression of Rhodococcus sp. Strain RHA1 in Soil Using a New Method of RNA Preparation from Soil
- Multiplicity of Aromatic Ring Hydroxylation Dioxygenase Genes in a Strong PCB Degrader, Rhodococcus sp. Strain RHA1 Demonstrated by Denaturing Gradient Gel Electrophoresis(Biochemistry & Molecular Biology)
- Complete Degradation of Polychlorinated Biphenyls by a Combination of Ultraviolet and Biological Treatments
- Isolation of Dibenzofuran-Degrading Bacterium, Nocardioides sp. DF412, and Characterization of Its Dibenzofuran Degradation Genes(GENETICS, MOLECULAR BIOLOGY, AND GENE ENGINEERING)
- Genetic and Biochemical Investigations on Bacterial Catabolic Pathways for Lignin-Derived Aromatic Compounds
- Biphenyl-inducible Promoters in a Polychlorinated Biphenyl-degrading Bacterium, Rhodococcus sp. RHA1
- Diversity of 2,3-Dihydroxybiphenyl Dioxygenase Genes in a Strong PCB Degrader, Rhodococcus sp. Strain RHA1
- Meta-Fission Product Hydrolases from a Strong PCB Degrader Rhodococcus sp. RHA1
- Nucleotide Sequences and Characterization of Genes Encoding Naphthalene Upper Pathway of Pseudomonas aeruginosa PaK1 and Pseudomonas putida OUS82
- Indigenous Plasmids of Beijerinckia Strains(Microbiology & Fermentation Industry)
- Characterization of polychlorinated biphenyl degradation in a fermentor by Comamonas testosteroni strain TK102
- Inhibition of Sulfur Use by Sulfite Ion in Thiobacillus ferrooxidans(Microbiology & Fermentation Industry)
- The Mechanism of Copper Leaching by Intact Cells of Thiobacillus ferrooxidans(Microbiology & Fermentation Industry)
- The Regulation of Sulfur Use by Ferrous Ion in Thiobacillus ferrooxidans(Microbiology & Fermentation Industry)
- Characterization of ligV Essential for Catabolism of Vanillin by Sphingomonas paucimobilis SYK-6
- Roles of the Ser146, Tyr159, and Lys163 Residues in the Catalytic Action of 7α-Hydroxysteroid Dehydrogenase from Escherichia coli
- Development of multipurpose automethod cell staining system.
- Molecular Cloning and Characterization of SRAM, a Novel Insect Rel/Ankyrin-Family Protein Present in Nuclei
- Isolation of Tribromoacetamide from an Okinawan Alga and Biological Activities of Its Analogs
- A locus of Pseudomonas picketti DTP0602,had, That Encodes 2,4,6-Trichlorophenol-4-Dechlorinase with Hydroxylase Activity, and Hydroxylation of Various Chlorophenols by the Enzyme
- Cloning and Sequence Analysis of Hydroxyquinol 1, 2-Dioxygenase Gene in 2, 4, 6-Trichlorophenol-Degrading Ralstonia pickettii DTP0602 and Characterization of Its Product
- Extracellular Production of Klebsiella Pullulanase by Escherichia coli That Carries the Pullulanase Secretion Genes(Microbiology & Fermentation Industry)
- Involvement of Two Basic Residues (Lys-17 and Arg-39) of Mouse Lung Carbonyl Reductase in NADP(H)-Binding and Fatty Acid Activation: Site-Directed Mutagenesis and Kinetic Analyses
- Enhanced Soybean Infection by the Legume “Super-Virulent” Agrobacterium tumefaciens Strain KAT23
- Characterization and Host Range Determination of Soybean Super Virulent Agrobacterium tumefaciens KAT23
- Characterization of Two Biphenyl Dioxygenases for Biphenyl/PCB Degradation in A PCB Degrader, Rhodococcus sp. Strain RHA1
- Characterization of a Transcriptional Regulatory Gene Involved in Dibenzofuran Degradation by Nocardioides sp. Strain DF412
- Detection of bphAa Gene Expression of Rhodococcus sp. Strain RHA1 in Soil Using a New Method of RNA Preparation from Soil
- Enhanced Soybean Infection by the Legume "Super-Virulent" Agrobacterium tumefaciens Strain KAT23
- Characterization and Host Range Determination of Soybean Super Virulent Agrobacterium tumefaciens KAT23
- Glucose Sensor Based on a Solid Electrolyte Cell Using Sodium Ion Conductor
- Characterization of a Transcriptional Regulatory Gene Involved in Dibenzofuran Degradation by Nocardioides sp. Strain DF412
- Enzymatic Properties of Terephthalate 1, 2-Dioxygenase of Comamonas sp. Strain E6
- Characterization of Two Biphenyl Dioxygenases for Biphenyl/PCB Degradation in A PCB Degrader, Rhodococcus sp. Strain RHA1
- Development of a strain for efficient degradation of polychlorinated biphenyls by patchwork assembly of degradation pathways(ENVIRONMENTAL BIOTECHNOLOGY)
- Characterization of ligV Essential for Catabolism of Vanillin by Sphingomonas paucimobilis SYK-6
- Genetic and Biochemical Investigations on Bacterial Catabolic Pathways for Lignin-Derived Aromatic Compounds
- Three-dimensional Structure of Microbial 2-Hydroxy1-6-oxo-6-phenylhexa-2, 4-dienoic Acid (HPDA) Hydrolase (BphD Enzyme) from Rhodococcus sp. Strain RHA1, in the PCB Degradation Pathway
- Expression in Escherichia coli of Biphenyl 2,3-Dioxygenase Genes from a Gram-Positive Polychlorinated Biphenyl Degrader, Rhodococcus jostii RHA1
- Crystallzation of Mouse Lung Carbonyl Reductase Complexed with NADPH and Analyssi of Symmetry of Its Tetrameric Moloucle
- Lectin Histochemical Study of Squamous Carcinoma in the Head and Neck Region
- ORTHODONTIC TREATMENT TO PREVENT OCCLUSAL FACTORS OF TMD IN CLASS III CLEFT PALATE PATIENTS
- Three-dimensional structure of the catalytic domain of chitinase Al from Bacillus circulars WL-12 at a very high resolution
- A VOLUME CHANGES IN THE ORAL CAVITY BEFORE AND AFTER SURGICAL ORTHODONTIC TREATMENT WITH MANDIBULAR SET : BACK
- Subdural Hematoma as a Complication of Hemostatic Deficiency Secondary to Liver Cirrhosis : Reports of Two Cases
- Successful tocilizumab treatment in a patient with adult-onset Still's disease complicated by chronic active hepatitis B and amyloid A amyloidosis
- The 24-hp consensus sequence responsible for regulation of the BphS1T1 two-component system in a hybrid promoter(GENETICS, MOLECULAR BIOLOGY, AND GENE ENGINEERING)
- Construction of Broad Host Range Cloning Vectors for Gram-negative Bacteria
- High-throughput method for a kinetics analysis of the high-pressure inactivation of microorganisms using microplates(METHODS)
- Characterization of the Third Glutathione S-Transferase Gene Involved in Enantioselective Cleavage of the β-Aryl Ether by Sphingobium sp. Strain SYK-6
- A COMMON ANTIGEN BETWEEN CANDIDA ALBICANS AND MYCOBACTERIUM TUBERCULOSIS
- High-throughput method for a kinetics analysis of the high-pressure inactivation of microorganisms using microplates
- Characterization of nitrate and nitrite utilization system in Rhodococcus jostii RHA1(GENETICS, MOLECULAR BIOLOGY, AND GENE ENGINEERING)
- Gene cluster and regulation system for 1,1-dichloro-2,2-bis(4-chlorophenyl) ethylene (DDE) degradation in Janibacter sp. TYM3221(ENVIRONMENTAL BIOTECHNOLOGY)
- Three-dimensional Structure of 2,3-Dihydroxybiphenyl Dioxygenase (BphC enzyme) from Pseudomonas sp. Strain KKS102 Having Polychlorinated Biphenyl (PCB)-Degrading Activity.
- EXPERIMENTAL STUDIES ON THE TREATMENT OF CANDIDIASIS
- Roles of the Ser146, Tyr159, and Lys163 Residues in the Catalytic Action of 7.ALPHA.-Hydroxysteroid Dehydrogenase from Escherichia coli.
- Crystallization of Mouse Lung Carbonyl Reductase Complexed with NADPH and Analysis of Symmetry of Its Tetrameric Molecule.