SOSUIによるゲノムからの膜タンパク質予測

元データ 2002-05-25 日本生物物理学会

概要

Many orphan sequences are being produced by human genome project. As the first step to the prediction of their structure and function, a software system SOSUI for discriminating membrane proteins from amino acid sequences alone was developed which is available on an internet web page. The analyses of amino acid sequence from total genomes by SOSUI system showed various interesting results, including the constant ratio (about 25 %) of membrane proteins in total ORFs from bacteria to eukaryota. The physical background of the algorithm of SOSUI is discussed together with the results of the genome scale calculation.

著者

美宅 成樹 東京農工大・工・生命工
Mitaku Shigeki Dept. Of Appl. Phys. Grad Sch. Of Engi. Nagoya Univ.
Mitaku Shigeki Department Of Applied Physics Graduate School Of Engeneering Nagoya University:tokyo University Of A

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